Ictalurus furcatus (blue catfish): 128599341
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Entry
128599341 CDS
T09387
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128599341 (smn1)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
128599341 (smn1)
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Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
Motif
Other DBs
NCBI-GeneID:
128599341
NCBI-ProteinID:
XP_053466852
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All DBs
Position
22:complement(12165075..12171767)
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AA seq
315 aa
AA seq
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MELTSSTSGTSGRTLLHSGNLLQCVYLGVGFICAVFMANGTSEVVFCRGTGQSDDSDIWD
DTALIKAYDKAVASFKNALKGEDAMAPHAKEKPGNKRKNNKKSKSRKKSNTSPEGEWNVG
DACYAYWSADGNLYAATISSVDQEKGTCVVYYNDYGNEEEQNLSDLLTDAAELDGESQKM
ADGKEVESSTEETDRSSTPHQSNQQKHKAKGKAPVVPPMWGPGFPPFPPPGSHFRMSDSR
RAGGSGPSFPGWSPMMPPGPPMIPPPPPISPDMLEDDEALGSMLISWYMSGYHTGYYLGL
KQGRKEAAAKKSHYK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaattgacgtcatcaacctccggcacgtcagggcgcacgctactgcattcgggaaat
cttttgcagtgtgtttatcttggtgttgggtttatatgcgcggttttcatggcaaatgga
acaagtgaagttgtgttctgtcgcggaaccggtcagagcgacgactcggacatctgggac
gacacggccttgattaaagcttatgataaagccgttgcatcgtttaagaatgcgctgaaa
ggagaagacgctatggctccacatgcaaaagagaaacctggcaataagcgaaaaaacaac
aaaaagagcaaaagcagaaagaaaagtaacacgtctcctgaaggagagtggaacgtcggg
gatgcctgttatgcgtattggtctgcagatggaaacttgtacgctgctaccatctcctca
gtcgaccaggagaagggcacctgcgtcgtatattacaacgactatggaaacgaggaggaa
cagaatctgagtgaccttctcacagacgctgcagaattggacggggagtcacaaaagatg
gctgacgggaaagaggtggagtcttctacagaggagactgataggtcttctactccacat
cagtctaatcaacagaaacacaaagctaaaggcaaagctccggtggtacctcctatgtgg
ggtcctggctttcctccttttcctcctcctggctctcacttcagaatgtctgacagcaga
agagcaggaggctctggaccatctttccctggctggtccccaatgatgcctccaggtcca
ccgatgatcccaccaccaccaccaattagtcctgacatgttggaggatgatgaggcttta
ggcagcatgttgatctcgtggtacatgagtggctaccacacaggatattacctaggctta
aaacaagggcgcaaagaagctgccgcaaagaagtcccactacaaatga
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