Ictalurus furcatus (blue catfish): 128599391
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Entry
128599391 CDS
T09387
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease 1 like 1
KO
K04987
polycystin 1L1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ifu03037
]
128599391
04040 Ion channels [BR:
ifu04040
]
128599391
Cilium and associated proteins [BR:
ifu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128599391
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128599391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
PLAT
PKD_4
Polycystin_dom
Moulting_cycle
Motif
Other DBs
NCBI-GeneID:
128599391
NCBI-ProteinID:
XP_053466903
LinkDB
All DBs
Position
23:complement(2250028..2302648)
Genome browser
AA seq
1691 aa
AA seq
DB search
MSLQRPRLLDVVPTIQHAAALALGRPANYNDDLSEAPGKGDVLPQPWLILPQARFFCRRA
VWIYTEKQAYATREDIKFLAMTEDPHPLEFDWHFGDQTAVRTPSRTFITKYLHPDRYTVL
SCFLVCRYNVTVSMSSSLGCVISDVYTVVIQRAVHLNRLLYTRSVLMNTTVPFSCRINAG
TDITYLWDFGDGTRRVGQDTEHHVFNSTGEFVVEVTVSNLVSSASLKGHVFVVLEPCQPP
PVKNMGPSKIQVWRYQPVCIGVTYEGQIQCNISKGVRYSWTLYGPTGLQLTSTGIKTNQQ
HLELPEYLLQYGTYRAVAKVQVVGSIVYSTYSVLLEVMPSAPVSIISGGTNVFINRHNSN
SNITVDGRRSYDPDFPDNIMSYSWKCRPVNTAKTSCFSKHVPASSALLIFPASALNSNCD
LFKLTLTVQSGNRSSSSEMFITMRSKPTRCTCIALNINISSLFNSACCCTCILFKVRFCG
SLDISLPSKLEEDTRFFQQPATSASPSILNQIETSTGDEIKITHDSVVSWHRQGHSVENQ
NPSFLDLLSEIDSASDYEDFYSGIEEADSGVSLGRPTGRHALSFXHSPHHLDEMISHSRE
YEGDNLVGPVNLGHVVSEKTLLDLHRELIQPALFESLTSTGITSSVITFKPMMLKPKNLY
MLEVSASSEEVLQGKTQLFFSTHPAPEGMVCHVQPSSGFEVHTHFSIFCTSGKEDLVYEY
SFSVGNSTKKLLYRGRDYQHYFYLPSGDPYDDHKVTIYITIGNRFGASTKPCPVNVKVWP
SFKRNSVSVSNPDEELYVFSPISPFRYIGSPNSSNADKKNKIIFFLCLTITVFFLSRFVY
GLSNLTTLIQLKNPQDIINYIFLMTATLNRLSLDPESCVKLQTQTRATLISAICQLDATN
QVLAYLCHRLLLMVDNTNVVNGHVADMKLFNCSTRREIKMRHLSTPLIIEFQKREERNVL
FKSTGTEFTLSHSEVNTHQFNITAELLKKAVQIRVEFRRPSRCAFPILLLFRMHQRPTPS
LYNVRKVYNWKGQVAQIFLPPSSQKDAGIAYLMLLNADYDKSARNKYIADEVGYTLSADS
TECLVWDGVKDWRSDGCSVLESFTATKVNCRSGTILYCRKLLLVLFKYSCTDLAMGVYIG
MTNYVRANPMVCIVIVVLVALYAVLLVFCNHADVQVEKNLGIFLLPDNNPSDQFLYAVTI
NTGFRSRARMTAKVHLVLYGEKRVSQTRELSSPDHTLFTRNSRTTFILSSAQSLGQIWQV
HVWHDGGGASPSWFLNHVTVKDIVDGSSWTFLAQCWLAVDEGDGRVERKLLALDRQLTFR
ELLHLNLTDCLEDFHPWLSVYSRPSYSTHSHTQRLSVCLLLLQAYMCANSVLIYIQEDQC
WLESGLIGVSLRSVWTGLCGLTLLPLGSLVSFLFRISKVLKACDLESMTCSGLTESSALQ
KPTDSISSIEITEENIPDGNDKLQPDRFKNTQFNLQTSSFPAHPAMVLAARQRARYLRLA
RPPTSTELQSVRSQIKKRTHLQKTIRSLCTLCLTNNNKKRWSEASSRLKKLWTSGWTGSS
THAVMLQFTLYSPVYNLFTTVTMLGETTCMGAVLPSVYIYSTRLHHSASALDYCTTAGEV
GKNHYKPDHVKHDLFCFFLQNFVLEEFEDLVDELLVKLNVISSSDEDQDNYEDQNTLQSA
YDYSSEVDIIQ
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcagaggcctcgtctgttggacgtcgtcccaactattcagcatgcggctgct
ctggctcttggaaggcctgccaactacaacgatgacctgtctgaggcaccaggaaaggga
gacgttctccctcagccttggctgatcctgcctcaggcaaggttcttctgcaggagagct
gtttggatctatactgaaaaacaagcttatgccacgagagaagatattaaatttctggct
atgactgaagatcctcacccactcgagtttgactggcattttggggaccaaacagcagtt
agaactccatccaggacattcattacaaaatacctccatccagacaggtatactgtgttg
agttgttttctggtttgcaggtacaacgttacggtcagcatgtccagcagcctgggctgt
gttatctctgacgtttatactgtagtgattcaaagagctgtgcatctcaacagactgctg
tacactcgctcggtgttgatgaacacaacagtaccttttagctgcaggatcaatgctgga
acagacatcacttatctctgggattttggagatggaacacgaagagttggacaggacact
gagcatcatgtgtttaacagtacaggggagttcgtagtagaagtgactgtctccaaccta
gtgagctcggcctctttaaaaggacacgtgtttgttgttcttgagccatgccaacctcca
cctgtaaagaacatgggacccagcaagatccaggtgtggcgttaccaacctgtgtgtatt
ggtgtgacgtatgaagggcagatccagtgcaacatctccaaaggtgtccgctacagctgg
actctctatggaccgactggactgcaactcacaagcacaggcatcaaaacaaaccaacaa
catctggagcttccagagtacctccttcaatatggaacatatagagcggtagctaaggtt
caggttgtaggcagcatagtttacagcacctactctgtcctgctcgaggtgatgcctagc
gcacctgtgagcatcatcagcggaggcacaaatgtgtttatcaaccgccacaacagcaac
tcaaacatcactgtggatggacgtaggtcatatgacccagattttcccgataacattatg
agttacagttggaaatgcaggccggtaaacacggccaagacgtcctgtttctccaagcat
gttcctgcttcctctgcattgctgatatttcctgcaagcgcactgaattctaactgtgat
ctgttcaagttgacgcttactgtacagagtggaaatcggtcctcttcttccgagatgttc
atcaccatgagatccaaaccgaccaggtgcacatgcatagcattaaacataaacatttca
tctctgtttaattcagcatgctgttgcacatgtatactgttcaaagtacgtttctgtggc
agtctggacataagcttaccttccaaactggaggaggacacacgcttctttcaacagcct
gccacttctgcgtctccatccatcctaaatcaaatagaaacatccacaggcgatgaaatt
aagatcacacatgacagtgttgtcagctggcacagacaggggcattcagtggagaaccag
aatccatcatttttagacctgctgtctgagatagacagtgcatcagactatgaggacttt
tattctggaatagaggaagcagactcaggagtttcactaggccgtccaactggtagacat
gcactctccttttgacattcaccccaccatttagatgaaatgatttctcattcaagagag
tatgagggtgataacctggtaggacctgtcaaccttggccatgtggtgtctgagaaaacc
ctgctggatcttcacagagagctcatccagcctgcactctttgagtctctcacctcaact
ggaataacctcctctgttatcacgtttaaacccatgatgctaaagccgaaaaatctttac
atgctggaggtctctgcaagttctgaggaggttctgcagggaaagacccagctgttcttc
tccacacaccctgctcctgagggaatggtgtgccatgtgcagcctagctcaggttttgag
gtccatacacacttcagcatcttctgcacttcaggaaaagaggatctcgtgtatgaatat
agctttagtgtgggaaactcgacaaaaaaactcctctataggggcagggattaccagcac
tatttttatcttccatctggagatccatatgatgatcacaaagtcaccatctacattaca
attgggaacagattcggagcatctaccaagccatgtcctgtgaatgtcaaagtctggccg
agctttaagagaaattcagtgtctgtctccaatccagatgaggaactgtatgttttttca
cccatcagtccattcagatatattggttcacctaatagtagtaatgcagataaaaaaaat
aaaataattttttttctttgtctaacaattactgtattttttctgtccaggtttgtgtat
gggctgagtaatctaaccaccctgatacagttgaagaacccccaagatattattaattac
atatttctcatgactgccacattgaaccgcttgagtttggatccagaatcttgtgtgaaa
ctacagacacaaacacgagccactctcatttcggcaatttgtcagctggatgccacaaac
caggtattagcctatctatgccaccgattgcttttaatggtggataacactaacgtcgtg
aatggacatgttgctgacatgaaactcttcaactgcagcaccagaagagaaatcaaaatg
aggcacttgtccactccacttataattgagttccagaagcgagaagagagaaatgtactc
tttaagagcaccggtacagagttcacactctcacactctgaagtgaatacacatcagttc
aacatcacggctgagctcctgaagaaggctgtgcagattagagtggagttcagaaggcca
tcaagatgtgctttccccatccttctgctcttcagaatgcaccaaagaccaacaccttct
ttgtacaatgtacgcaaggtctataattggaaaggacaggtggctcagatctttctacca
ccttcatctcagaaagatgctggaattgcatatctgatgctcctcaatgctgactatgat
aaaagtgctagaaataaatacattgcagatgaagtgggctacacactgagtgctgattcc
actgaatgtttagtttgggatggtgtgaaagactggagatctgatggatgttccgtgctc
gagagtttcaccgcaaccaaagtcaactgcaggtctggtactatactatattgcaggaaa
cttctcttagtgttatttaaatattcatgtacagatttagctatgggtgtgtatattggt
atgacaaattatgtccgtgccaacccgatggtgtgtattgtaatagtggtattagtggct
ctctacgctgtgctgttggtgttttgtaatcatgctgatgttcaggtggaaaagaatttg
gggatattcctcctgccagacaacaatccttcagaccagttcctctatgctgttactatc
aacacaggcttcagatcaagggccagaatgacagcaaaggttcatttagttctgtatggt
gagaaacgagtatctcagacaagagagctcagcagtcctgaccacacactcttcacccgc
aattccaggacaacgtttattttgagctcagctcagagtctgggccaaatatggcaagtg
catgtgtggcacgatggaggaggtgcgtctcccagttggttcctgaatcatgtgacggtg
aaggatatagtagatggatcaagttggacctttctggcgcagtgctggttggcagtagat
gaaggagatggacgagtggagcgaaagctgcttgctttagaccgacagctcacattcaga
gagctgctgcatctgaatctcactgattgcttagaggacttccacccatggctgtctgtg
tacagtcggccatcttacagcacgcattcacacactcagcgcctgagtgtatgtctcctg
ctgctgcaggcttacatgtgtgctaactccgtactcatatacattcaagaagaccagtgc
tggttggaatcaggcctgattggtgtttcactacgttcagtgtggacaggactgtgtgga
cttactctgctgcctttaggctctcttgtgtccttcctcttccgtatcagcaaggttttg
aaggcatgtgatttggagtctatgacctgcagcggactgacagaaagctcagcactgcag
aagcccacggactctatctctagcattgaaattaccgaagaaaatattcccgatggcaat
gacaaattacagcctgaccgtttcaaaaacacccaattcaacctccaaactagctctttt
ccagcacacccagcgatggtgctggcagcccgtcagagagccagatacctgcggctcgca
cgtccacctacttccactgagcttcaaagtgtgaggagccaaattaaaaagaggacacat
cttcagaaaacaataaggtctctatgtactttatgcttaacaaataataataaaaagaga
tggtctgaagcatccagcaggcttaagaaactgtggacttcaggctggactggcagctcc
acccatgccgtaatgctgcaattcactttatacagccctgtttataacctctttaccacg
gtcaccatgcttggagaaacgacgtgcatgggagctgttctaccgtcagtctacatttac
tctaccagacttcatcactctgcctctgcccttgattactgcactacagctggagaggtg
ggaaaaaatcattacaaacctgatcatgtaaagcatgaccttttctgtttttttctacag
aattttgtcctggaagagtttgaggatctcgttgatgagctcctggtcaagctcaacgtc
atttccagtagcgatgaagaccaggacaactatgaggaccagaatacgcttcagtcagca
tatgactacagctcagaggtagacattatacagtaa
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integrated database retrieval system
