Ictalurus furcatus (blue catfish): 128599466
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Entry
128599466 CDS
T09387
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128599466 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128599466 (trip13)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
128599466 (trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_25
AAA_18
TIP49
AAA_14
Viral_helicase1
AAA_24
ATPase_2
NACHT
NPHP3_N
AAA_5
AAA_28
TsaE
ABC_tran
RNA_helicase
AAA_17
RuvB_N
bpMoxR
AAA_33
Cytidylate_kin
AAA_30
DUF815
AAA_11
AAA_RNF213_4
IstB_IS21
AAA_7
SLFN-g3_helicase
Mg_chelatase
NB-ARC
AAA_19
Rad17
PduV-EutP
AAA_3
NTPase_1
nSTAND1
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
128599466
NCBI-ProteinID:
XP_053467013
LinkDB
All DBs
Position
23:complement(16469019..16482272)
Genome browser
AA seq
447 aa
AA seq
DB search
MTAPYNAESLPTVYRMNGEKMEVGWVHHQQPCENGVADRVEVHIEVHVKSQSTARRTEVR
THVLALLDRHSLVIGSFKWTEFDDDFLTKNVESVSVVDVDAQPLDLKTSNLCVHIFSLND
DGPSTLNLEEEEELSAANHWLLPAAEFHGIWESLVYEEGIKTQLLDYVSTAIFFSDKNVD
SNLVAWNRVVLLHGPPGTGKTSLCKALAQKLSIRLSGRYSYGQFVEINSHSLFSKWFSES
GKLVTKMFQKIQELIDEKEALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLD
QIKRHSNVVILTTSNVTEKIDLAFVDRADIKQYIGLPSARAIFNIYLSCLEELMKRQIIY
PRQQLLNLEELDTLDYIESEVTGLSLHLQKIAEKSVGLSGRTLRKIPFLAHALYAKKSVL
TVESFLNAMDNAVAHQIKEREKLVNCI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacagccccatacaatgctgaaagtcttcctactgtttacaggatgaacggggagaaa
atggaggtgggttgggttcaccatcagcagccctgcgagaatggcgttgctgaccgagtc
gaagttcacatcgaggttcatgtcaaatctcagagcacggcgagacgaactgaagtaagg
acacacgttttggctctgctcgaccgacacagcctcgtaatcggctccttcaagtggacg
gagtttgatgatgacttcctgacgaaaaacgtcgagtctgtctccgtggtggacgtcgat
gcacagcctcttgatttgaagacgagcaatctgtgtgttcacatcttctctctcaacgac
gatggaccgagcacgctcaacctggaagaggaggaggagctatctgcagccaatcactgg
ctcctgccagcagctgagtttcatgggatctgggagagcctggtttatgaggaaggaatc
aaaacgcaactcttggattatgtttcgacagcaatcttcttctctgacaaaaacgttgac
agcaatctggttgcttggaatcgtgttgtgttgcttcacggacctccgggcacgggaaag
acttcactgtgtaaagcacttgcacagaaactctccatcagactctctggaagatattcc
tatggacaatttgtagaaatcaacagccacagtttgttctcgaaatggttttcagagagc
gggaaactcgttacgaagatgtttcagaagattcaagagctgatagatgagaaagaagcc
cttgtttttgtgcttattgatgaggtggagagtctaacggcagcgagaaacgcctctcag
gctggaaccgaaccttctgatgccatccgagtggtcaactctgtccttacacagctggac
cagatcaaacgacattcgaacgtggtgatcctcactacctcaaacgtaacggagaagatc
gacctggccttcgtggacagagcggatataaagcagtatatcggcctgccgagcgcccga
gctatcttcaacatctacctgtcctgtctggaggagctcatgaagcggcaaatcatttac
ccacggcagcagctgctgaacctcgaggagctcgatacgttggactatatcgagagcgaa
gtgaccgggctcagtctgcatctgcagaaaatcgcagagaagagcgtaggtcttagtgga
cgcaccttgaggaaaattccctttttggctcatgcgctttacgcgaagaagtctgtgttg
acggtcgagagctttctgaacgccatggacaatgctgtggctcatcagataaaggaacgg
gagaagctggttaactgtatatga
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