Ictalurus furcatus (blue catfish): 128599522
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Entry
128599522 CDS
T09387
Name
(RefSeq) basic helix-loop-helix domain-containing protein USF3
Organism
ifu
Ictalurus furcatus (blue catfish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
128599522
NCBI-ProteinID:
XP_053467173
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All DBs
Position
23:5104204..5117074
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AA seq
2328 aa
AA seq
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MPEIIQNQPETTQKLTRRKKNKETHNAVERHRKEKINSGIKRIGDLLPCSQALKQSKNMI
LGEAYRYISELKQQNDEMLLNGGDKVQAEEIKRLRQQVEDLRKESAHYIELLKANGINFL
DDPTIHWKGKQRCAKVAKITPTHLMSKGIIVYSNENLACSTSKMSAPSNAVSHLDKQPVN
ALAIQPSCNVQMGPGQALGVPNGTQITVTSSTSSHIPLATLIPAVSKPCLAVVEQYAAVA
PVAPKLPPPGNYVTLQGVCPKLAVTAPSPQETQPAKPTPTLASSTSCTTPVQLQPVFSLS
SLPQTVVSNTLVSDASSMLPQDTESMSLAQTLPGNTAHLRTSAANSTQTTWTTLQLTGNT
VQPVCRALVTEASNSGHNIPQLSVCPVVANPQVHPIPVQVQTQVPMQLQTPKPTRIPVRS
NPPQLLPAVLPCPQTPVVTQTSLLSQTPVVLHQPPLVTQTGLLTQSQTVVAPSTILPKPV
SPSTQSHTYPAIQPKPQIHHAMPPQHELQPTMPSQPQAQPAIIPQPQSAIVPPLQQTLIP
QSQATTLPVLQTMQVVQMNSDGTPVIGTSLPQNNPNVVILQQASTCPAPQVIREDVTNQA
ACQHIVIIQTPTMPPTQQNHQTNVVPSAVPTLANQITTSSNPCPSTAQAKQLVHILPRPS
AQVQTQAPQTITVNGQVYVLQSVKSADTGSPQVSQSATQIIQPTCEEPNTNVALNCLGAL
TSLSQSISQSSNQSISQVSNQNNVQLQITPPLDTTVQSSLSKLVSGVSTSTETVLTPVVP
VSTSVSCPVNILPKKTSVASVNQPKQMSVKRARPVKRKEPNQKRNMCRIAAKPANSMSSQ
ANIEQGHSSTITDIHFMNSACEDMSHKTSTINTSTATRVTSTCNNSTAVCVSSSSKLIHS
PANLATNTTSVTPLVDNEVAQSHGKSVAAIPPSYSKTVSTLNSVTPLEDSSVVHASNEPV
LANNNDLQQNESTVSVLSSQCSTLNRGVTSSTKSITNDNSSTTLISQDKSTVNNCITSCI
RTESSPTLVQNNTTLTSVRSSENNLKVSSVETALLQPQSIPSGTSADPTKRLETGSLMEK
IPQVQTEPAVVKAADTSQMQTPFALHSTSSCSDTPSPVLHQESRNLNTFNKVLKHSEVNM
SVATASQIHSVGIKLGQSNSSKELSRGEHSSATAENISEAESFLQKETVLSQEVSTMGNE
SYDSSLVANRQTDSPTAGASSNRGFSVASLLPTGQNITASPNTFGSFSFTSEQAEILAMA
ARAIFEQESPGRKSDSCSGDNPSSTTATRWDLSKTQQTPIIKERVSQQLKQANQGDITVS
KTPSLVEVSGISTSGVRLPVNTAYSQSQASTLTSLNVNNLIRPSSVQSYPGSPNLGQQVS
VPSPGGAAILVSQTSSQVTQSCSGPAQVNEYTPLKSALMRTHIGAGISERHQKDMPKRSA
QEDLVLPINKRSKPCPSGSIARIDVKGTEHVQAMSGQMPPNSSSLMTGNHSDGGGALFSG
NTFMTTVLRPSEGHCPPQLAPHEQSQPSVLHLQQGHVQHGTPQSGQILGGSHYLKHQHHQ
EQQRHLYQLQHHLIQPDTQIHSIQQRTLLQDQNVHKKRVVRGGQTGPPVNLQKQHHLEKN
GVQHQPSQQSQQHQQQAQQHQQQQQQQSQQHQHQQQPQHQQQKPQQLQQQQQQQQQQQQQ
QQMQQQGSHSRHQHLQQQLQQQHFSRPEKNCEGQQAGPRAHQNNHLSQQDRQPGQDHGAM
QRLMGSRTLEQQLTSQASNPVSRSSDLACTTSRQERHRLSSYSAEALIGKTSSAGDQRMG
LHTLHTARGNSQDQSELQGYVDSSHGKGNISHNPQGRLAQEHSGAPDIQRISERLPFKTL
GNGPQVNNFEVQVSRSGDMTSKSVAPAQRGPQPQTGFRMGAGSSGDGRSRGTYGTHPSAQ
GLQTGAGLPREQDSCHQSFMQSLLAPHLPEQTGHQRAAQGCPPVSIEYNCVTGVSPGELQ
AKVSSPNLYPTQTAPPMHLGDNNKGHISQVSGNIHGSVRSVLPHPPSTPHSSSDTGRAQG
SSRSLSAVSQRAHHIGPDPQSSKIRPGDRPRSGNLRPVNTFEPESPLPLPSGGGVLLGRP
QTGGESRRRSIVRFMPEGSQVGSDSNLVSDQHLTQNFGFPFMGEGGMNPPPPINANSSFI
PPVTQSSASRTPALLPVEPQNTLPSFYPSYSPAAHPSIPNEIPIQYFSNQIFPSSSADKS
STTPLNNRFGSILSPPRPVGFAQPSYTLLTDITPMPIANSSGITPHLSNFNLTSLFPEIA
SAMPPDGSSMPMSPLLLANTSSSDSNKQSNRPAHNISHILGHDGTSAV
NT seq
6987 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaataatacagaatcagccagaaactacccagaaactcacacggaggaaaaaa
aacaaagagacacacaatgcagtcgaaagacaccgcaaagagaagatcaattccggtatc
aaacgaattggagatctcttgccttgctcccaagccttaaaacagagtaagaatatgatt
ctaggggaagcctatcgttatatctccgagctaaagcaacagaatgatgaaatgctgctc
aacggaggagacaaagtacaagcggaagagatcaaacgcttacgacagcaggtggaggac
ttaagaaaggaaagtgctcattacattgagctcctcaaagcaaatgggatcaactttctg
gatgaccctactatccactggaagggcaagcaacgctgtgctaaagtagccaaaataaca
ccaactcacttgatgtcaaagggaataattgtgtactctaatgagaatttggcttgttca
acaagtaaaatgtctgctccttcaaatgctgtttctcacctggataaacagccagtaaac
gctttagccattcaaccatcttgcaacgttcaaatgggtccaggtcaagcacttggtgtc
ccaaacggaacacagataacggtcacctcttctacatcttcacacattccactagcgact
cttattcctgctgtgtccaagccctgtcttgcagtggtggagcagtatgctgctgtggca
cctgttgctccaaaattgccccctcctgggaattatgttactcttcaaggcgtatgtccc
aagcttgcagtcactgctcctagtcctcaagaaactcagccagccaagcctacaccaact
cttgcatcttctaccagttgcacaacgcctgtccaacttcagcctgtatttagtctatcc
tccttgcctcaaaccgtggtcagtaacacccttgtttctgatgcttcttcaatgctgcca
caggataccgaaagcatgtctcttgctcaaacattaccaggcaacactgctcatcttcgg
accagtgcagctaacagcacacagactacatggacaacactacagcttactggcaacacg
gtgcagcctgtctgtcgagctttggtcacagaagccagtaactctgggcataatattcca
caactttcagtatgtcctgttgtggcaaatccccaagtccatcccattcctgtccaagtg
caaacgcaagttcctatgcaactgcaaacccccaaaccaacacgcatccctgttcggtct
aaccctccccagttgttaccagctgtgcttccctgtcctcaaacacctgttgttactcag
acatcacttttatcccagacccctgtggtacttcatcaaccacctcttgtaacacagaca
gggttactaactcagtcacaaactgttgtagctccatccacaattttacccaaacctgta
tctccatcaactcaatcccacacgtatccagccatacaacccaagcctcaaatccatcat
gccatgccacctcagcatgaactacaacccactatgccatctcagccccaagcccagcca
gctataataccgcagccccagtctgccattgtgcctccgcttcagcaaacactcattccc
cagagtcaagccaccacattgccagtactccagacaatgcaggttgtgcaaatgaattca
gatggaaccccggtaatcgggacatccttgcctcaaaacaatcctaatgttgttattttg
cagcaggccagtacatgtccagccccacaagtaattagagaggatgtgaccaatcaggcg
gcatgccagcacattgttataatccagaccccgacaatgccgcctactcaacagaaccat
caaactaacgttgtgccatctgcagttcctactttggctaatcaaataaccacctccagc
aacccctgtcccagtactgctcaagctaaacagctggttcatatccttccacgtccttca
gcacaggttcagacacaggcaccccagacgatcactgtgaatggacaggtttacgtctta
caatcggtgaaatcggcagacacggggagccctcaggttagtcaaagtgctacgcaaatc
atccagcccacctgtgaggaaccgaacaccaatgttgcattgaattgtttgggtgccctc
actagccttagccaaagcatttcacaatcctccaatcaaagcatttcacaggtctccaat
caaaacaatgtacaactgcaaattactccacctttagacactacagtgcagtcttctctg
tccaagttggtttcaggagtcagtacatccactgagactgttctaacccctgtcgtaccc
gtgtcaacatcagtaagttgtccagttaacattctgccaaagaagaccagtgtagcttct
gtaaaccaacccaaacagatgtcagttaaaagggccagaccagtcaagagaaaagaacct
aatcaaaagaggaatatgtgccgaattgctgcaaagccagcaaacagtatgtcatctcag
gcaaacattgaacaaggacattcatccactataacagatattcactttatgaattctgca
tgtgaggacatgagccacaaaaccagtaccataaatacatccacggccaccagagttact
tcaacatgcaataattctacagcagtttgtgtcagttcaagtagtaaattaattcacagt
cctgccaatttggcaacaaatacaacaagtgtcactcccctagtggacaatgaagtagct
caaagtcacggaaaaagcgttgctgcaattcccccatcttacagtaaaacagttagcacc
cttaattctgttactccccttgaggatagctcggtagtccatgccagcaatgaacccgtt
ttagccaataataatgaccttcaacaaaatgaatcaacagttagtgttctctcttctcag
tgtagcacgttgaacagaggtgttacttcttcaacaaaatcaatcacgaatgataactca
tccactacactgatttctcaagataaatcaacagtcaacaattgtattactagttgcata
cgaacagaatcaagtcctactttagttcagaacaataccacactcacaagtgtccgttct
tcagaaaataatttgaaggtttcctctgtcgaaactgcacttctccaaccccagagcata
ccttcaggcacgagtgctgatccaacaaagcgtctagaaacaggatccctcatggagaag
attccacaagttcaaacagagcctgcagtagtcaaagctgcagacacttctcagatgcag
acaccttttgctttgcactccacatcaagttgttcagatacaccatcaccagttctacac
caggaatccaggaatttgaacaccttcaacaaggttcttaaacattcagaagttaacatg
tctgtggcaactgctagtcagattcattctgttggtatcaaacttggtcaatcaaattca
agcaaagaattaagcagaggtgaacattcaagtgctaccgcagagaatatatctgaggca
gagtctttcttgcaaaaagaaactgttctttcacaggaggtatcaacaatgggaaatgaa
tcatatgattcctcgctagtggcaaatagacagaccgattcaccaacagcaggagcttca
agtaacagaggcttttcagttgcatcgctgcttccaacaggtcagaatattactgcgtct
cctaatacgtttggatcttttagtttcacctctgagcaggcagaaatattagcaatggct
gcaagagctatatttgagcaagaaagcccaggaaggaagagtgatagctgcagtggtgat
aacccatcaagtacaactgccaccagatgggatctctcaaaaacacagcaaactcccata
atcaaagaaagagtcagtcaacagttaaagcaagcaaatcaaggtgacataaccgtatca
aagactccttcactagttgaggtttctggcattagtacatctggtgtccggcttccagtg
aacacagcttattctcagtcacaagctagcactctcactagtctaaatgttaacaatctc
atcaggccaagctctgtccagtcttacccagggtctccaaaccttggtcagcaagtatct
gttccatcaccagggggagcagcaattctagtgtctcagacatcatctcaggtcactcaa
agctgctctggcccagcacaagttaacgaatatacacctttgaaaagtgcactcatgaga
actcacataggtgctgggatatctgaacgtcatcaaaaggatatgccaaagcggtctgcc
caagaagaccttgttcttcctataaacaagcgctcaaaaccatgcccatctggtagtatt
gctcggatagatgttaaggggacagaacatgtccaagcaatgtctggacaaatgccgcca
aattcctcatcattaatgactgggaaccattctgatggaggaggtgccctgttttcagga
aatacttttatgaccactgtacttcgcccatcagaaggacactgccctcctcaactggca
ccacatgaacaaagtcaacctagtgtgctgcacctacaacagggacacgtacagcatggc
acaccacaatctggacagatcttgggaggaagccattacctcaaacatcaacaccaccaa
gaacaacagagacacctctaccaacttcagcatcaccttatacaaccagacactcagatc
cacagtattcaacagaggactctgctacaagatcagaatgtccataaaaagagagtcgtg
cgaggtggtcagacaggacctcctgttaatttgcagaagcagcatcacttggagaaaaat
ggtgtacagcatcaaccatcacagcagtctcagcagcaccaacagcaagctcagcagcac
caacagcagcagcagcaacagtcccagcagcaccaacatcaacaacaaccacaacaccaa
caacaaaaaccacagcagcttcaacaacaacaacagcagcaacaacaacaacagcagcaa
caacaaatgcagcaacaaggttcacactcgaggcatcaacatcttcagcaacaacttcag
caacaacacttcagtagaccggaaaagaattgtgagggccaacaggcaggccccagggct
catcagaacaaccatttgagtcagcaagaccgccagccaggacaggatcatggagccatg
caaaggttgatgggctctcgcactttagagcagcaactaacttcacaggctagtaatcct
gtgtctcgctcttcagaccttgcttgtactacatcacgacaagagcgtcatcggctgtct
agctattctgctgaggctcttattgggaagacttcaagtgctggtgaccaacgtatggga
cttcatacactgcacaccgctcggggcaattcacaggatcagtctgaattacaaggttat
gttgactcctcacatgggaaaggaaatattagtcataatcctcaaggcagactagcccaa
gaacactcgggggctccagacattcagcgtatatcggagcgtttacctttcaagactctt
ggtaatgggcctcaagtaaacaactttgaagtgcaagtgtctcgcagtggagatatgacc
agtaaatctgtggctccagctcagaggggtcctcagccacaaaccggatttagaatgggg
gctggttcttctggtgatggacgtagtcgtggtacatatgggacacatccttcagcacag
gggctacaaactggagctgggctgccacgtgagcaggactcatgccatcaaagctttatg
caaagtttattggctccacatcttcccgaacaaactgggcaccagagggctgcacaaggc
tgtcccccagtgagtatagagtacaactgtgtgactggagtttctcctggggaacttcag
gctaaagtctcaagccctaacttgtaccctacacagacagctcctcccatgcatcttggg
gacaacaataaagggcacatttctcaggttagtggaaatatacacggatctgtacgatca
gttctgccccatcctccgtcaacaccgcacagtagctcggatacgggccgtgctcaaggc
tcttccaggtcactttcagctgtcagtcagagagcccatcatattggaccagatccgcaa
agttcaaaaatccgcccaggagatcggccaaggtctggcaacttgagacctgtaaacaca
tttgagcctgaaagtccattgccacttccatcaggtgggggagtactgcttggacggcca
cagacaggtggtgaatctcggcgcagaagtattgtgcgttttatgccggaaggttcacag
gttggcagcgacagcaatttggtttcagatcagcatctcacccagaactttggctttccc
tttatgggtgagggaggtatgaaccctccacctccgattaatgcaaactcatctttcatt
cccccagtcacacagtccagtgcctcacgtacccctgctctccttcctgtagagcctcag
aacactctcccttctttctacccctcatattcacctgctgctcatccaagcattccaaat
gagattcctatacagtatttttctaaccagatatttccaagttcaagtgctgataagagt
agcactactccgttaaacaaccgctttggatctattctttctccaccccggcctgtgggc
tttgcacagccgagctatacgctgctgaccgatataacaccgatgcccatagcaaactcc
tcgggcattactcctcatttatccaactttaacctgacttctctgttccctgaaatagcc
tcagcaatgccccctgatggttcctcaatgccaatgtcccctttactgcttgcaaatact
tcctcctcagactctaacaaacaatctaatcgtccagctcacaacatcagccacattctt
gggcacgacgggacctctgctgtttaa
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integrated database retrieval system
