Ictalurus furcatus (blue catfish): 128599561
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Entry
128599561 CDS
T09387
Symbol
stag1b
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128599561 (stag1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128599561 (stag1b)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128599561 (stag1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
128599561
NCBI-ProteinID:
XP_053467250
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All DBs
Position
23:complement(10039223..10072292)
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AA seq
1258 aa
AA seq
DB search
MINSEFPVLQDSSNESGQGDTVSLSLSVSELEDTGEGKGKKKRGRPGRPPAASKKARKSP
VDKGGRRPNGMAQQNGDGGDPTTLFEVVKLGKSAMQSVVDDWIESYKQDRDMALLDLINF
FIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTIAGPQWKKFRYNFCEFIG
VLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIN
QDNTQRQYEAERNKVAGKRATDKLELLLEKRKELQENQDEIENMMNSIFKGIFVHRYRDA
IAEIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQTLYTNRGL
FPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEDALSNEDCENVYHLVYSA
HRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAY
LVDSLWDSSQELLKDWDCMIELLLEEPVQGEEVLGDRHESSLIELMVCTIRQAAEAHPPV
GRGTGKRVLTAKEKKTQIDDKNKLTEHFIIALPMLLSKYQADAEKVANLLQIPQYFDLEV
YSSGRMEKHLDALLKQIKLVVEKHTETEVLEACSKTYSILCSEEYTIMNRVDIARSQLID
ELSDRFNHSVEDLLQEGDEADDDDIYNVLSSLKKLTAFHNAHDLTKWDLFKNCYRLLKMG
IEQGSMPEQIAVQALQCSHYSILWQLVRITEGSPSKDDLLALRRVVKSFLAVCQQCLSNV
NTPVKEQAFMLLCDLLMIFSHQLTTGSREALQPLVFNPDNTLQSELLSFVLDHVFIDQDD
ENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYNDYGDI
IKETLSKTRQTDKIQCAKTLILSLQQLFNELVQDQGPNLDRTSSHVSGIKELARRFALTF
GLDQIKTREAVATLHKDGIDFAFKFPNPKGAEYPPPNLAFLEVLCEFSSKLLRQDKKTVH
SYLEKFMTEYMMERREDVWLPLIAYRNSLLTGGDEDRMSVTTGSTTSRASTIRSKRGRPP
LHKKRADAAEESVDGSWVMRNDTIQTPGGLQTPQLTSTVLRENPRQAAEHVPDQDSSEPG
SEPDYIHNQQMQMSWLDQQKMEEVNRKERGGMNYMKARSGGVRQQVRGLMEDDAEPIFED
VMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSTAIIEDDSGFGMQMF
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgattaactcggagttccccgttctacaggactcgtctaacgagtctggacagggagac
acggtgagtctgagtctgagtgtcagtgagctggaggacactggagagggaaaagggaag
aagaagagaggacggccaggaagacccccggcagccagtaagaaagctcgtaagtctcca
gtagataaagggggcaggaggccgaacggcatggcacagcagaacggagacggaggagat
cccactacactgtttgaggtggtcaaactgggcaagagcgccatgcagtccgttgttgat
gactggatcgaatcgtacaaacaggaccgagatatggctcttctggatctcatcaacttc
ttcatacagtgctctgggtgtaaaggtactgtaagaattgagatgtttagaaatatgcag
aatgcagaaattatcaggaagatgacggaggagtttgatgaggacagcggtgattacccg
ctcaccatcgctgggcctcagtggaagaagttccgctataacttctgtgagtttatcggt
gttctgatccggcaatgtcagtacagcatcatctacgacgagtacatgatggacacggtc
atctcgctcctcaccggcctgtccgactcacaggtccgagccttcagacacacctccacc
ctcgcagcgatgaagctgatgacagcgctggtgaacgtggctctgaacctcagcatcaac
caggacaacacacagagacagtacgaggcagagaggaacaaggtcgctgggaaaagggcc
acagacaagctggagctgctgctggaaaagaggaaggagctgcaagagaatcaagatgag
atcgagaacatgatgaactccatcttcaaaggaattttcgttcatcgctacagagatgcg
attgctgagatcagagctatttgcatcgaggagatcggtgtgtggatgaagctgtacagc
gacgcctttctcaatgacagctatctgaagtacgtgggctggacattacacgaccggcaa
ggagaagtccgactcaagtgtctcaaagcactgcagaccctctacacaaaccgaggcctt
ttccccaaactggaactcttcactaatcgctttaaggaccgtatcgtgtccatgactcta
gataaagagtacgatgtagcggtggaggcgattcggctcgtcactctgatcctgcatggc
agtgaggacgcgctctccaatgaagactgtgagaatgtttatcacctggtctactccgct
catcggcccgttgccgtggcagcaggagaattcctccacaggaagctgttcagtcgacat
gaccctcaggcggaggaggctctggctaaacgccgcggtaggaacagccccaatggcaac
ctcatcagaatgctggtgctgttcttcctcgagagtgagcttcatgagcatgcagcatat
ctggtggacagtttgtgggacagctctcaggagctgctgaaggactgggactgtatgatc
gagctgctattggaggaacctgtacagggagaggaagtgctgggagacagacacgagagc
tctctgatcgagttaatggtgtgcaccatcagacaggcggccgaggctcacccccctgtg
ggccggggaacggggaagagggttctcactgctaaagaaaagaaaactcagattgatgat
aagaacaaactgactgagcacttcatcatcgcactgcccatgctcctgtcaaagtatcag
gcggacgctgagaaagtggctaacctcctgcagatccctcaatattttgacctggaggtg
tacagctctggccgaatggaaaagcatctggacgccctgctgaagcagatcaagctggtg
gtggagaagcacactgagacggaggttttggaggcgtgcagtaagacctacagcatcctg
tgcagtgaggagtacaccatcatgaaccgtgtggacatcgcccgcagccagctcatcgac
gagctctccgaccgcttcaaccactccgtggaggacctgctgcaggagggcgatgaagct
gatgatgatgatatctacaatgttctctcatccctgaagaaactcactgctttccataac
gctcacgacctgaccaaatgggacttgtttaaaaactgctaccggttgctgaagatgggg
atagagcagggctcgatgccggagcagattgcagtgcaggctcttcagtgttctcattac
tccatcctgtggcagctggtgcgcatcactgagggttctccatccaaggatgaccttctc
gctctgagaagagtggtgaagtcgttcttggcggtgtgccagcagtgcctgtccaatgtg
aacactcctgttaaagaacaggcattcatgttgctgtgtgacctgctgatgatcttcagt
caccagctgaccacggggagcagagaggccctgcagccgctggtgtttaatcccgacaac
acgctgcagagtgagctgctgagcttcgtcctcgatcacgtctttattgaccaggatgat
gagaaccagagcatggagggtgatgaggaagatgaagcaaataaaatcgaggctttacac
aagaggaggaatctgctggctgctttcagtaagctgatcatttacgacatcgtggacatg
cccgcagcagcagacatctttaaacactatatgaagtactataatgattatggtgacatc
atcaaggagactctgagtaagaccagacagacggataagatccagtgtgccaaaactctc
atactcagtttacagcagctctttaacgagctggtacaggatcaggggccaaatttggac
cgaacctcgtcccatgtgagtggcattaaagagctggctcgccgtttcgctctgactttt
ggactggaccaaatcaaaaccagagaggctgtagcgactttgcacaaggacgggattgac
tttgcgttcaagtttccgaaccctaaaggagcagagtatcctccacccaacctggctttc
ctggaagtgttgtgcgagttctcttctaaactcctccgtcaggataaaaagactgtccac
tcgtacctggagaagttcatgacggagtatatgatggagcggagggaggacgtgtggttg
ccgctgatcgcctacaggaactccttgctgacaggaggtgatgaggaccgcatgtctgtg
accacgggcagcaccaccagcagagccagcaccatacgcagcaagaggggcagaccgccg
ctacacaagaaacgcgccgatgcagcagaagagagtgtggacggctcgtgggtgatgcgt
aacgacaccattcagactcctggaggtctgcagacgccacagcttacctccacggtgctg
agggaaaacccacgccaagcagcagaacacgtccctgaccaggactcttctgagcccggc
tctgaacccgactacattcacaatcaacagatgcagatgtcatggctggaccagcagaaa
atggaggaggtgaacaggaaagagagaggaggaatgaactacatgaaggcacggagtgga
ggcgtacggcagcaagtacgaggcttaatggaggacgacgctgagcccatcttcgaggat
gtgatgatgtcatcgcgtggacagttggaggacatgaacgaggagtttgaggacaccatg
gtgatagatctgccgccgtcgagaaacagacgtgagagagccgaactcagaccggacttt
tttgactctacagcgattatagaagacgattcgggattcggtatgcagatgttttga
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