Ictalurus furcatus (blue catfish): 128599666
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Entry
128599666 CDS
T09387
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128599666 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128599666 (spata13)
Membrane trafficking [BR:
ifu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128599666 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
SH3_9
PH
DUF3104
Motif
Other DBs
NCBI-GeneID:
128599666
NCBI-ProteinID:
XP_053467481
LinkDB
All DBs
Position
23:4944413..4968816
Genome browser
AA seq
1268 aa
AA seq
DB search
MRKTGHADGASTQGRMPLAYPSNGTSLAHHPEAPVRLICGSFEAEKRMNPGAPMRPVRSE
ACCEKRGLNGVNTHPWSTPVIVDAQDLSCSSKNVRIFSFQRKRGAAGSEQTPLRGPASAS
QAWPGLHFMGSFKKLRSSVLQGIQNRGGVTGDNQEKDLYLTNEESNGFLVTKRNFGSSQT
NRKEMSAVSNGGSVTTPSTCVSDEEDDYEEDGYGLQRNSHFSRSIRRAYGAGRISLLDNV
RKQSEGPQEPAARTRPCSTVEPIGLNVIFDTDDNVKASSRLSKSADNLHVFKSPFKHKLP
SSQPQSLEDSSTPNFQRTASASSADVQECVSGRRRGAVGVRGKMHKLVGSLTDLSVNRKP
NPSPTTTAPLSALSQLHDDYTRRTPCVPASERQRRPPPSYTCPSDKQKVQADVHSHTPAI
HADSLVPNTVNSLNHQVPECTSSTEQDPASSATLCSDSSITPLTPVTGNSATVEEEQNVK
TDVIQDKHCPSPGQEQGLDNVKVNLECIWKTPERQSENLETPSGDPSFTDLLKRNDESCS
DSVFISPPVTPTSAAEWPLVTTPSSPASSCDTPDSSVPRRRAARNKPRPISDYGQLMCRK
YAVPKEEVELQDDAQEECNANETHAADLHIQENSCLNGHTESRRRRPISVIGGVDLFASP
DEKEDAGLPSPVTRPPVPSHGVPPYRAISARLRPCVFSQSTPTGLDRVGRRKPHRVLSDG
CTGLDDSVSEEDGSFDELTEGTPYLQPEVDLSTLNQYISSGHAVYAEALWDHVTMGEQEL
AFKAGDVIRVLDAQEKDWWWGLVGERQAWFPSSFVRVRVNQEDSAAESVENSPEQREALS
KEPHSQTTEHRDQMRANVVQEIMNTERVYIKHLRDICEGYIRQCRKHPGMFTDAQLKTIF
SNIEEIYKFQRKFLKDLEKNYDKENPHLSEIGSCFLQQGEGFSIYSEYCNTHPAACAELQ
RLMKQGRYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYEG
VCKAHEAMKNVASLINERKRRLESIDTIAHWQEAILHWEGEDVLSRSSELIHSGELTRVV
RAGKTQQRSCFLFDHQLVFCKKDVLRRDLLHYRGRLDTDSVVPKDLTDGRHPDLGTLRNA
IALRNHDTLEVLCVLSCRKAQDKQLWLEAFGRERRRVKEDQEMGMEISETQRKEAIQNAR
KSKQGKIKNIKYAGHPVSHHHQPLHPIHQRHITVPTSIPQQQVFSLAEPKRKPAHLWYTF
TRNALFRK
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagacaggccacgcagatggagcttcaactcagggcaggatgcctctggcgtac
ccatcaaatggtacctctcttgctcatcaccccgaggctccagtgaggcttatctgcggc
tcctttgaggcggagaagcggatgaatccaggtgccccaatgaggccagtccgctctgag
gcttgctgtgagaaacgtggactcaatggtgtaaacacacatccatggtccacccctgtg
atcgttgatgcgcaagatctatcatgctcctccaagaatgtgcgtatcttttccttccag
cgaaagcgtggtgcggcaggctctgagcagacaccgcttcgaggcccagctagtgcttcg
caggcatggccaggtctccatttcatgggttccttcaaaaagctgcgctcctctgttctc
cagggcatccaaaacaggggcggtgtgacaggagacaatcaggagaaagacttgtactta
accaatgaggagagcaacggtttcttagtaaccaaaagaaattttggaagtagccaaacc
aacaggaaggagatgtcagcagtgagcaacggagggtctgtaaccacaccaagtacatgt
gtttcagatgaagaggatgattacgaggaagatgggtatggcctacagaggaactcgcat
ttctcaaggagtatacgtcgagcttatggagcaggacgcatctcccttttggacaatgta
cgaaagcaatcagaaggtcctcaagaacccgctgctcgcactcgaccctgcagcaccgtg
gaacccattgggctcaatgtcatttttgatactgatgacaatgtgaaggcctcgagtaga
ctaagcaaaagtgctgacaatctgcacgtattcaagagccctttcaaacacaaattaccc
tcgagtcagccccagagcctggaagattccagcaccccaaatttccagagaacagctagc
gcttcatctgcggatgtgcaggaatgtgtatcaggtcgacgtagaggagccgtaggagtg
cggggaaagatgcacaagctcgtcggaagtttaacagatctgtctgtcaaccgcaagccg
aaccctagccccaccaccacagcccccttatcagccctcagccagctccatgacgactac
acccgcaggactccctgtgttcctgctagcgagcgtcaacgcagacccccaccctcctat
acctgtccgtctgacaagcagaaagtacaggctgatgttcatagccacaccccagctata
catgccgactccttagtacccaataccgttaattccttgaatcatcaggttcctgagtgt
accagctccacagaacaggatccagcgagctcggcaactttgtgttcagatagttctatc
acccccctcacgcctgtcacaggaaatagtgcgactgtggaagaagagcaaaatgtgaaa
actgacgtcattcaggacaagcactgccccagtccaggacaggaacaaggactggacaac
gttaaagtaaacttggagtgcatctggaagactccggagagacagagtgaaaatctagag
acaccatccggagacccgtctttcacagacctcctaaaacgaaacgatgaaagctgcagc
gactcagtgttcattagtcctcctgtcacacccaccagcgctgcagagtggcccctggtg
acaacaccaagctcgccagcctcctcctgcgacacgcctgactcttctgtgcccaggagg
agggcggccagaaacaaacctcgaccaatctcagactacggacagctcatgtgcagaaaa
tatgctgtccccaaggaggaagtggaactccaggatgatgctcaggaggagtgtaatgct
aacgagacacacgctgctgatttgcacatccaagagaacagctgtctgaatggacacacg
gaaagcaggaggaggcgaccgatctctgtgataggaggagtggatctgtttgcatctcct
gacgagaaggaagatgccggtttgccttctcccgtcacacgaccccctgtaccctctcac
ggtgtgcctccgtaccgcgccatatctgcccgcctgcgcccctgcgtcttctcccagagc
acaccgacgggcctggaccgagtgggtcgccgcaaaccgcaccgagtcctcagtgacgga
tgcacagggctggatgacagcgtgagcgaggaggacggcagttttgatgagctcacagaa
ggaacaccgtatctgcagccagaggtcgatctgtcaactttaaaccagtacatctcgtca
ggacatgccgtttacgccgaggccctgtgggaccacgtgacgatgggcgagcaggagctg
gccttcaaagccggggacgtcatccgggtgctggatgcccaagagaaagactggtggtgg
gggctggtgggcgagcgtcaggcctggttcccctccagctttgtgagagtgcgtgtgaat
caggaggactcggccgctgagagtgtggagaactctccagaacagcgagaggctctatct
aaagaaccacacagccagaccactgagcaccgagaccagatgagggctaatgtggtccag
gagatcatgaacactgagcgcgtctacatcaaacacctccgagatatctgtgagggttac
atccgccagtgcaggaaacacccgggcatgttcacggacgcccagctcaagaccatcttc
agcaacatcgaagagatctacaagttccaaaggaaatttctgaaggatctagaaaaaaat
tacgacaaagaaaacccccatctgagtgagatcgggtcgtgcttccttcaacagggtgaa
ggtttctccatatactcggagtactgtaacacacacccggcggcgtgtgcagagctgcag
cgactgatgaagcagggacgctataagcacttcttcgaggcctgtcgcctcctgcagcag
atgattgacatctccatcgctggcttcctgctcacgcccgtgcagaagatctgcaaatac
ccacttcagctgggcgagctgctcaaatacacacctaaagaccacagtgactacgaaggc
gtgtgtaaagcccatgaggcgatgaagaacgtggccagtctgatcaacgagaggaagagg
aggctggagagcatcgacaccatcgcgcactggcaggaggccatcctgcactgggagggc
gaagacgtgttatcacggagctctgagcttatccattcaggcgagctgacgcgagtggtc
cgtgccgggaagacgcagcaacgtagctgcttcctgttcgatcaccagctggtcttctgt
aaaaaggacgtcctacgacgggacctactgcactaccgcggacgccttgacacggacagc
gtagtgcccaaggacctgactgacgggcgtcacccggacctgggcacgctgcggaacgcc
atcgccctgcgcaaccacgacacgctggaggtgctgtgtgtgctgagctgcagaaaagcc
caggacaagcagctgtggctggaggctttcggtcgagaacgcagacgtgtgaaagaggac
caggagatgggtatggagattagcgaaacccaaaggaaggaggccattcaaaatgcccga
aaatcaaagcaaggcaaaattaaaaatataaaatatgcaggtcacccagtgtctcatcat
caccaacccttacaccctatccaccagcgccacatcactgtcccgaccagtatcccccag
cagcaggtcttctctttagcagaacccaagaggaagcctgcacatctgtggtacacgttc
acgcgcaacgcccttttccggaaatga
DBGET
integrated database retrieval system
