KEGG   Ictalurus furcatus (blue catfish): 128599788
Entry
128599788         CDS       T09387                                 
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
  KO
K22753  E3 ubiquitin-protein ligase RNF6 [EC:2.3.2.27]
Organism
ifu  Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ifu04121]
    128599788 (rnf6)
Enzymes [BR:ifu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     128599788 (rnf6)
Ubiquitin system [BR:ifu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    128599788 (rnf6)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_4 zf-RING-like zf-P11 zf-RING_16 Prok-RING_4
Other DBs
NCBI-GeneID: 128599788
NCBI-ProteinID: XP_053467713
LinkDB
Position
23:complement(5285474..5293042)
AA seq 687 aa
MDPPGGRDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRPESRPQNSEEGQEGSSAAAEPGTESTNGDSLLEWLNTFRRTGNATRSGQ
SGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTSDPIELPVPQRASASIRTPL
RPAPYSTQHPTPYSTTRPTLGRRAQARRTRSSTTPPITPPLISQAPYTSLRRNLALPQPA
ALPPPPPPPPPSQAMPTSLPQEQDSTNSVQGQVQTQPPSLSNEEEQEVNDVPDCPEAVSQ
ASVQGAAASREARRTRSRGRVRRIAVSRSSRRSRSPLDRNSTRSSSPTPGNSAPAIEPAG
NTAAAAAAAAAAALVETVEVPAEPTVPVESAPEAGTEEGETPASGTAGGVRRHPTIMLDL
QVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIR
IPLRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADPEGSAPGQNVGINAAAQT
QRAQDGEATTGNAVTDSGREGGAAGEAGQARVGANGRDTNNLVENGTLPILRLAHFFLLN
DEEDDEHPRGLTKEQIDNLATRTYGQASLEGEQGRACSVCINEYAQGNKLRSLPCAHEFH
IHCIDRWLSENNTCPICRQPILSSHQD
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggaccctcccggcgggcgagacgagcgtcgccgtcaggccgagcgtcttcggcgggag
gaggcgtactaccacttcatcaacgagctgagcgaggaggagtatcggctcatgagagac
agcaacctgctgggtacaccaggtgaagtcacagccgaggagctgagacagcgtctggat
ggagcaaaggagcgtgtgtcctcacagcctcgccctgaatcacgtccacagaacagcgag
gaaggacaggagggcagcagtgctgctgctgagccgggcaccgagagcacgaacggagac
tctctgctggagtggctgaatacgttccggcgcacaggcaacgccacccgcagcggccag
agcggcaaccagacgtggcgtgccgtcagccgcacgaatccaaacagtggcgagtttcgc
ttcagcctggaaatcaacatcaatcacgagcagcccgagccgggggaacacagcgacact
tctgaccccattgaacttcctgtcccgcagagggcctctgcgtctatacgcactcccctg
aggcccgcgccctattccactcagcaccccaccccttattctacaaccaggcccactctg
gggaggcgggctcaggcacggcgcactcgcagtagtactaccccacccataaccccgcct
ctgatctcgcaggcgccgtatacgagtttgaggaggaaccttgctttgcctcagccagca
gcgcttcctcctcctcctcctcctccccctccttcacaggccatgcccacgtccctgcct
caagagcaggatagtactaacagcgtgcagggtcaagtacagacgcagcctccttcactt
agtaacgaggaggagcaggaagttaacgacgttccggactgtccagaagctgtgtctcag
gccagtgtgcagggggcggcggctagccgtgaggcacgcagaactcgttcacgtggtcgg
gtccgccggatagctgtgtcccggtcctcgcgtcgtagccgctcacctctggataggaac
tccacccgaagctctagccccacccccggcaacagtgcccctgcaatagagcctgctgga
aacacggctgctgctgctgctgctgctgctgctgctgctctagtggagacggtggaagtt
cccgctgagccgacagtaccagttgaatctgcccccgaagcgggcactgaggaaggcgag
acgccagcgtcaggcacagcaggaggtgtccgccggcacccgactatcatgttggatttg
caggtgcgcagaatccggccgggcgagaaccgagaccgggacagcattgccagccgcacg
cggtctcgtgcccgcgccgctgaaaatacggtcactttcgagagcgacagcggaggcttc
agacggaccatctcgcgctcggaacgcgctggcatccgcacctacgtaagcactatccgc
attcctctgcgccgcatctcggagacgggtttgggcgagccgagttccacagcgctacgc
tccatcctgcggcagatcatgaccggcttcggagagctcagctctttaatggagaccgag
gcagacccggaaggttccgcccctggacagaacgtgggcatcaacgctgcggctcagaca
cagcgtgcgcaggatggtgaagccacgacagggaacgctgtgaccgattcgggacgagag
ggtggagcagcgggtgaggcaggccaggcgagggtgggtgccaacgggcgggacacgaat
aacctggttgagaacggcaccttgcccatcctgcggctggcgcacttcttcttgctgaac
gacgaggaggacgacgagcacccgcgcggcctcaccaaagagcagatcgacaatctggcc
acgcgcacctacggccaggcgagcctggagggcgagcaggggcgcgcatgcagtgtatgc
atcaacgagtacgcgcagggcaacaagctgcgcagcctcccctgtgcacatgagttccac
atccactgcatcgaccgctggctctcggagaacaacacgtgccccatctgtaggcagccc
attctgtccagccatcaggactga

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