Ictalurus furcatus (blue catfish): 128599788
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Entry
128599788 CDS
T09387
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128599788 (rnf6)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128599788 (rnf6)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128599788 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
zf-RING_16
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128599788
NCBI-ProteinID:
XP_053467713
LinkDB
All DBs
Position
23:complement(5285474..5293042)
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AA seq
687 aa
AA seq
DB search
MDPPGGRDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRPESRPQNSEEGQEGSSAAAEPGTESTNGDSLLEWLNTFRRTGNATRSGQ
SGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTSDPIELPVPQRASASIRTPL
RPAPYSTQHPTPYSTTRPTLGRRAQARRTRSSTTPPITPPLISQAPYTSLRRNLALPQPA
ALPPPPPPPPPSQAMPTSLPQEQDSTNSVQGQVQTQPPSLSNEEEQEVNDVPDCPEAVSQ
ASVQGAAASREARRTRSRGRVRRIAVSRSSRRSRSPLDRNSTRSSSPTPGNSAPAIEPAG
NTAAAAAAAAAAALVETVEVPAEPTVPVESAPEAGTEEGETPASGTAGGVRRHPTIMLDL
QVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIR
IPLRRISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADPEGSAPGQNVGINAAAQT
QRAQDGEATTGNAVTDSGREGGAAGEAGQARVGANGRDTNNLVENGTLPILRLAHFFLLN
DEEDDEHPRGLTKEQIDNLATRTYGQASLEGEQGRACSVCINEYAQGNKLRSLPCAHEFH
IHCIDRWLSENNTCPICRQPILSSHQD
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcccggcgggcgagacgagcgtcgccgtcaggccgagcgtcttcggcgggag
gaggcgtactaccacttcatcaacgagctgagcgaggaggagtatcggctcatgagagac
agcaacctgctgggtacaccaggtgaagtcacagccgaggagctgagacagcgtctggat
ggagcaaaggagcgtgtgtcctcacagcctcgccctgaatcacgtccacagaacagcgag
gaaggacaggagggcagcagtgctgctgctgagccgggcaccgagagcacgaacggagac
tctctgctggagtggctgaatacgttccggcgcacaggcaacgccacccgcagcggccag
agcggcaaccagacgtggcgtgccgtcagccgcacgaatccaaacagtggcgagtttcgc
ttcagcctggaaatcaacatcaatcacgagcagcccgagccgggggaacacagcgacact
tctgaccccattgaacttcctgtcccgcagagggcctctgcgtctatacgcactcccctg
aggcccgcgccctattccactcagcaccccaccccttattctacaaccaggcccactctg
gggaggcgggctcaggcacggcgcactcgcagtagtactaccccacccataaccccgcct
ctgatctcgcaggcgccgtatacgagtttgaggaggaaccttgctttgcctcagccagca
gcgcttcctcctcctcctcctcctccccctccttcacaggccatgcccacgtccctgcct
caagagcaggatagtactaacagcgtgcagggtcaagtacagacgcagcctccttcactt
agtaacgaggaggagcaggaagttaacgacgttccggactgtccagaagctgtgtctcag
gccagtgtgcagggggcggcggctagccgtgaggcacgcagaactcgttcacgtggtcgg
gtccgccggatagctgtgtcccggtcctcgcgtcgtagccgctcacctctggataggaac
tccacccgaagctctagccccacccccggcaacagtgcccctgcaatagagcctgctgga
aacacggctgctgctgctgctgctgctgctgctgctgctctagtggagacggtggaagtt
cccgctgagccgacagtaccagttgaatctgcccccgaagcgggcactgaggaaggcgag
acgccagcgtcaggcacagcaggaggtgtccgccggcacccgactatcatgttggatttg
caggtgcgcagaatccggccgggcgagaaccgagaccgggacagcattgccagccgcacg
cggtctcgtgcccgcgccgctgaaaatacggtcactttcgagagcgacagcggaggcttc
agacggaccatctcgcgctcggaacgcgctggcatccgcacctacgtaagcactatccgc
attcctctgcgccgcatctcggagacgggtttgggcgagccgagttccacagcgctacgc
tccatcctgcggcagatcatgaccggcttcggagagctcagctctttaatggagaccgag
gcagacccggaaggttccgcccctggacagaacgtgggcatcaacgctgcggctcagaca
cagcgtgcgcaggatggtgaagccacgacagggaacgctgtgaccgattcgggacgagag
ggtggagcagcgggtgaggcaggccaggcgagggtgggtgccaacgggcgggacacgaat
aacctggttgagaacggcaccttgcccatcctgcggctggcgcacttcttcttgctgaac
gacgaggaggacgacgagcacccgcgcggcctcaccaaagagcagatcgacaatctggcc
acgcgcacctacggccaggcgagcctggagggcgagcaggggcgcgcatgcagtgtatgc
atcaacgagtacgcgcagggcaacaagctgcgcagcctcccctgtgcacatgagttccac
atccactgcatcgaccgctggctctcggagaacaacacgtgccccatctgtaggcagccc
attctgtccagccatcaggactga
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