Ictalurus furcatus (blue catfish): 128599794
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Entry
128599794 CDS
T09387
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128599794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128599794
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128599794
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128599794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
Baculo_IE-1
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
128599794
NCBI-ProteinID:
XP_053467719
LinkDB
All DBs
Position
23:20002096..20003764
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AA seq
403 aa
AA seq
DB search
MSEAFTPRTRGAEEILDEIYSDLLECKVCFETFSSEPRARRPRNLPCGHVICLGCVCALS
HAVSRRLECPFCRKQCDQGGTYECQVLVDLQDMICSYFPPKKPRDREGDLGSGVMRLHGI
FGGWGPLINPTGVAVSRTSQDVLVVHGGHERVSVFGCRGQFLRSFGRYGHDSFHICHPLD
VTVTPGGHIVVTDAGDRSVKVFSSTGSPVATVSDLFQLPWGVDVDLSGNILVTDAEAGTL
WQVVMDFERGVVLVKKLMLEDLKTPRAVACCRASGRVAVVEHLQTGERPKEDATLTRLKV
FSSDFVLLRQLDGFTPHLPGLSVSSITFNRNGELIVADVQQGTVWSLGDVHKAPELIPLV
REGLVRPAGLVATDEDTLIVLDAGDHTVKTYTTDPEDLYGDKT
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggccttcacgcctcgcaccagaggagctgaggagatcctggatgagatctac
tccgatctgctcgagtgtaaagtgtgttttgagacgttttcgtccgaacccagagctcga
agaccacgcaacctgccctgcggtcacgtgatctgtctgggttgcgtctgtgccctgtct
cacgccgtgtcacgccgtctcgagtgccctttctgcaggaagcaatgcgatcaaggtggc
acctacgaatgccaggtcctcgtcgaccttcaggatatgatctgttcgtatttcccccca
aaaaagccccgggatcgggagggagatctggggtcaggggtcatgcggctacatggcatc
ttcggaggatggggtccgctcatcaacccaaccggtgtggctgtgtccagaacgtcacag
gatgtcctggtggtacatggagggcacgagagagtgagcgtgttcggttgtcgtggtcag
ttcttgcgtagtttcgggcgctacggtcacgacagctttcatatctgccatccgttagat
gttactgttactcccggcggccatattgtcgtgacggatgcaggagatcgttcggtcaag
gtgttctcatcgacaggaagtcctgtggccaccgtctcagacctgtttcagctgccttgg
ggtgttgacgtggacctctcggggaacatcctagtgacggacgcagaagccgggacactt
tggcaggtcgtcatggacttcgaacgtggcgtggttttggtaaagaagctgatgctggaa
gatctaaagactccacgagctgtcgcttgctgtagagcgtctggacgcgtcgcagtggtg
gaacatctccagactggggaacgtcccaaggaagacgccacgttgacgcggttgaaggtg
ttcagcagcgatttcgtcctcctcaggcagctggacggtttcactccgcacctgccgggg
ctgagcgtctcgtccataacctttaacagaaacggcgagttaatcgtagctgatgtgcag
cagggaaccgtgtggagtctgggagacgtccacaaagcaccagagttaattccactcgtt
agagaaggactggtgcgtccggcgggattagtggcgaccgacgaggacacgctgatcgtc
ctggatgccggagatcacaccgtcaagacgtacacgaccgaccccgaggacttatacggc
gataaaacgtga
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