Ictalurus furcatus (blue catfish): 128599806
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Entry
128599806 CDS
T09387
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ifu03037
]
128599806 (rttn)
Cilium and associated proteins [BR:
ifu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128599806 (rttn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
128599806
NCBI-ProteinID:
XP_053467739
LinkDB
All DBs
Position
23:3555170..3624182
Genome browser
AA seq
2233 aa
AA seq
DB search
MSVKCPCDSLDVMLGDLPPGHAPWICVAVVIIVFLSPAHSLVEIRVRSLRNVVSKLQLSL
VSPADLVQERQLFINLLHWFNFPEVPLQEEVLQLINTLSTHPTGALMLRDVGGVDFLTQL
SSNVDPQLRTITDAILDQLFHLHIYPPNTSSDQQSSSSFHPVEENAVRGYFQQNALSQTN
AAAPPSLSVNTSVRCFTFSVFPWLCLTATDRHILSSNESSLRSDNPDLVRTTCELLRDVI
MQDFPAEIFLQRPSIVQNLVQLLSVSSENDSSSLALHALACLQQLCGNLKSRLRFHRDPS
FCSAKHDALSQNSSTSYPQEVRGTQRSGVSTPEDLSPRPSVLGRPGLRVRGDGQDGDAAS
TSSSSSSSQREFLPGPNLELDGEDPPELRVQQWNMARFCVETLQHTLPLLRTEKMKVFQK
ALELLSDILALLRVIVSPHELWEECSITANELRENLRVCMEKLGDIMCHHRHLASSEQPD
STLIHHRMSYMGTSVFTVRLLQTLLPVEKASENIPESTASAVFHLCLDFPFSLSFPSIHE
SAVAYLEQSNSENHSLYCRVSQAANTMEATCSFLKEVQAEGEKNWLELLELAGQAIDGFP
YHQHLPLIKEFIHICSYLWKSAQASPLLQMESQKILLKLLSHPLLPVKAETYACTLDVVK
ECLGVHNVSRPASSICSGVHFLFHPRVLYEISAFGLHDPAKEVNSAAKDLLLYLLKGRLM
MTALSWSKFNEALYPVIPVLQSHVGTEDALESSVLLISGLSDEIGDTAHSSATRLRAVIR
LLFTKQHAVRSTAAQHLSHHLANSEDNGTSRLVVDSSTLSSLPSLYVTDKCVDVRLDDSN
KSYLKVDCMNKLYSIFTSETVDMVLRKSAAEQLAVVLQDTAMHAVLKTQGLTDKLVSLIT
ESVTSRGGSVGCLSEPGVTMLRKLVYADPSLRHTLAQQPAFLLALLRASLLMKANQRDVT
EAAVLMCFLLFDEIAAVDVCTGKADTDTGFTPFSLPVCIIRRYNLPFRAASHHAVSPNCI
VLPLYTDLMELRAAKEALSFSWNRAWHCGTDTLLIRRRDTTTRTPEFHADLVMSESQVAS
VRACDMRAGLHECVNAIRSAGSHTGVTFALTRIHLYLLTDQLAVKHDTHSAKSTLQKLGW
RGAVERFLQVKPACPEDEVLLADVISFLNTFFRQHRSDSDDRDLKWLLELLLKKDTRVLL
DLLLDEKTHMDPQRHSGIHHGHQLQRDLTSLFNTLLRLTHISDRMCTLLSGPLASEFAVR
LLQCLRVSDAPRFYGLPSLGRSLRSMTHTTALPGWSTHTSSMEPHTLCRKYLSGLLEVIS
SFYVEWGGNAMSFMGKGVTKNAVISLLHLSHEMMSESKEKDWMSLWSLGPEQSADDPCSA
QFGLAWLIPLWVDRDPEVRCASLALGAALSSLESGCVMLSNSCQNISGGLWATLLNILLE
RQECSMVCREAAFLLQNLLVMPMPANTEEAKDCFWQSPCVHDEATGVSLVGLPALQALLY
HCHFFDHVGQMVRSCYTGRYTPTHPWPISVSADVDDSVRQWRGSTAVLNHTQGSGSISTS
STLLLSDTRSPVLSSSVAAQEPPFNRLGTQGQSDSDSSDSRVSQECVEGSDSISVVTPHL
LSAVCGLLTNLLCVLPEFTHSALLENHILQGLLSVLDAAELERCLTELNTPDLLPSDVED
SRSQVLRSVCYVQSVCKLVQADVVHSEDCLSQSELIKPLLNNLISILTLSHTHLDSQVFY
QVFLCISSDVHTQNALLHTWTDVFMLLAILLRRNYAACGPHVCGTLGKLWQRFSDTIRAC
VDQCGADPSLYTVSAQFLCVVFSEEAKKRGTRLERSASLTAALNSQSGEQLCELLLEQYD
KTPFQNPLKKVTAKVLMPLLACSSSAQSYACKAGLIDSCVEQMKQIHSQLHLESVRQGKT
THRKKEENSRKELRMVLEILRNCLYQHKECKEVATDLKLSSVVLSLWPWLLLNDPGMIAA
LELLCVYTANCTAACSAVCGSSVHAALPRNPVTNTLMHAVMKLASQVPPDNNSVHALSFS
LLANLSISRDCRGLLQKSNFLQHFLSLPMPRVSSKGSTAAVVLSQWLQLLLNISFEEDGQ
QMIMKMRGALEMLTDLAQGKHGDQKRTSLLILHNICFCSANKPQVLVCDKAVELLVSCLE
SSSLNTRALGASALWALLHNYQKAKVTLKCPSIRLKVDGAYTLAKKGAEPKTEENTNIYL
LKCLEHLSRLLNT
NT seq
6702 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaatgcccgtgtgacagtctggacgtcatgttaggtgatcttcctccgggg
catgctccgtggatttgtgttgccgttgttattattgtttttctttccccagctcactcg
ttagtggagatccgagttcgctccctgaggaacgttgtctccaagcttcagctcagtctc
gtctcccccgctgatcttgttcaggagcgacagctctttatcaacctactgcactggttt
aacttccctgaagtcccgctgcaggaggaagtgctgcagctcattaacacactctctacg
catccgaccggtgcccttatgttaagagatgtaggaggagtggactttctaacccagctg
tcgtccaacgttgacccccagcttcgaactatcacagacgcgatccttgaccagctcttc
catcttcatatttacccaccgaacacgtcctctgaccagcaatcgagctcctctttccat
cccgtggaggagaatgcagttagaggatatttccagcaaaatgcgctgagccaaacaaac
gctgcagcaccacccagtttatcagtgaacacctctgtaaggtgcttcacgttttcagtt
tttccttggttgtgtttgactgcaactgacagacacatattatcatcgaacgaaagctct
ttacgaagtgataatcccgacttagtgaggaccacctgcgagcttttgcgagacgtgatc
atgcaggactttccagcagaaatattcctgcagcggccaagtatagtgcaaaatctggtg
cagcttctcagtgtgagctcagagaatgattccagctcgttggctctccacgctctggcc
tgccttcagcagctctgtggaaacctgaaaagtcggctgcgtttccacagagatcccagc
ttctgctcagccaagcacgatgcactctctcagaactcctcaacgtcgtatcctcaggag
gtcagagggacccagaggtcaggagtttcgaccccggaagatttgtccccccgcccttct
gttctaggacgtcctggtttgagagtccgaggggacggacaggacggcgatgctgcctcc
accagcagcagcagcagcagctctcagagagaatttctccccgggcccaacctggagctg
gatggcgaggatccaccggagctccgggtgcagcagtggaacatggccagattttgcgtg
gagactctacagcacacacttcctctcctcaggacagagaagatgaaggttttccagaag
gcacttgagctgctgtcggacatcctcgcgttgctaagggtcatcgtgtccccacatgag
ctgtgggaagagtgcagcatcaccgcgaacgaactgagagagaatctgcgggtgtgtatg
gaaaagctgggagacatcatgtgccatcaccgtcacctggcatcgtcggagcaacctgac
tcaactctgattcaccaccgcatgtcctacatggggacttctgtcttcaccgttcgcctt
ctgcaaaccctcctacctgtggagaaggcaagtgagaacattcctgagagcacagcgtct
gctgttttccatctctgtctggatttccccttcagtctctcttttcccagcattcacgag
tcagcagtggcctacctggagcagtcaaactctgaaaaccatagcctgtactgcagagtt
agccaagctgctaacacaatggaggccacatgttcctttctaaaggaggttcaggctgag
ggagaaaagaattggctggagctgctggagctcgctggccaagccatcgatggctttccc
taccatcagcacctaccactcatcaaggaattcatccacatatgctcctacctgtggaag
tctgctcaggcaagcccactgcttcagatggagagccagaagattcttctgaagctttta
tcacatcccctgctgccagtgaaggctgagacatatgcatgcactctggatgttgtcaag
gagtgtttgggtgttcataacgtgtccagaccagcttcatccatctgcagcggcgtgcat
ttcctcttccatcctcgcgtcctttatgaaatcagtgccttcggccttcatgatccggca
aaagaggtgaattcggctgccaaggatcttcttctgtacctactaaagggacgattgatg
atgactgctttgagttggagtaaatttaatgaagcactttacccggtcattcccgtgctg
cagagtcacgtaggcacggaggatgccctggaaagcagcgtcctgctgataagtgggctc
tcggatgagattggagacacggcccattcctcagctactcgactccgcgctgtaatcaga
ctgctcttcaccaaacaacatgcggtgagaagcacagcagctcaacacctatcacatcat
ctggccaattcagaagacaacggaacatcccggcttgtcgtggacagctcgactctgtca
tcactgccttctctctacgttactgacaaatgcgtggacgtcagactagacgactccaac
aagtcttaccttaaggtggactgcatgaataaactgtacagtatcttcacctcggagacg
gtggatatggtcctgcgcaaatccgcagccgaacagctggcggttgttttgcaggatact
gcaatgcacgcggtactgaagacgcagggactgacggacaaactcgtgtctttgattaca
gagagcgtgaccagccgtggagggtctgtcgggtgtctgtccgagccgggcgtcacgatg
ctgaggaagttagtatacgcagatccgtctctacgtcacacgctggctcagcaaccagct
ttcctcctcgcactgctccgagcctcgctgctgatgaaggccaatcagagagacgtgact
gaagccgcagtgctgatgtgtttcctgctttttgatgagatcgccgctgtggatgtgtgc
actggaaaagctgacacagatacaggatttacaccgttctctctgccggtctgcattatc
agaaggtataatctgccgttccgcgccgcgtctcaccacgcggtgagtcccaactgcatc
gttctgccgctttataccgatctgatggagctgagagctgccaaagaggcgctgagcttc
agctggaacagagcctggcactgcggcaccgatacgctgctcatacgcaggagagacacc
actactcgaacacctgagtttcatgctgatctggtgatgtcggagtctcaggtcgcgtca
gtgcgagcgtgtgatatgagagcagggcttcacgagtgtgttaacgccattcgctcggcc
ggatcacacaccggggtcaccttcgctctgactagaatacacctttatctcctgactgat
cagctggctgttaaacacgacacacactccgccaagagtacgctgcagaaactcggctgg
cgtggtgctgtggagagatttcttcaggtgaaacccgcgtgccccgaggacgaggtgctg
ctcgcggacgtcatatcgttcctgaacactttcttcaggcaacatcggtctgattctgat
gaccgagatctgaaatggctcctagaattactcctgaaaaaggacacgcgcgtgctgctg
gacctgctgctagacgagaagacgcacatggaccctcagagacacagcgggattcaccac
ggacatcaactacagagagacctgacctcgctgttcaacaccctgctgcgtctcacacac
atctccgacaggatgtgtactctcctctccgggccgttagcgtcagagttcgccgtccgt
ctactgcagtgtctccgtgtttcagacgccccgcggttttacggccttccctctctgggg
cgttctctacgcagcatgacgcacaccaccgctctgcccggctggagcactcacacaagc
agcatggagccacacacactctgccggaaataccttagcggcttacttgaggtaatttcc
tccttctatgtggagtggggagggaacgccatgtcctttatgggaaaaggagtgaccaag
aatgcagtgatctccctgcttcatctgtcccatgagatgatgtctgagagcaaagagaag
gactggatgtctctctggtctcttgggcctgaacagagtgctgatgatccgtgttcagct
cagttcggcctcgcttggttaatcccactgtgggtggatcgtgacccagaggtgcgctgt
gccagtctggcgctgggcgcggctctctcatcgttagaaagcggctgtgtgatgttgtcg
aatagctgccagaacatctcaggcggtttgtgggcgacgctgctcaacatcctgctggag
agacaggagtgcagcatggtgtgccgagaggcagcgttccttttacaaaacctgcttgtg
atgccgatgcctgccaacaccgaggaggccaaagactgcttctggcagagcccatgtgtt
catgatgaggcaacaggcgtgtcgttggtgggtctcccggccctgcaggctcttctctat
cactgccattttttcgatcatgtgggtcagatggtgaggagttgctacacgggtcggtac
actcccacacacccttggcccatcagcgtctctgccgatgtagatgactctgtgaggcag
tggagaggcagtacagctgtgctgaatcacacccagggttcaggatccatttccacctcc
agtactttgctcctgagtgacactcgttctcctgtcctctcctcttctgtagcagcacag
gagcctccattcaacagacttggcacacaaggacagagtgactcagacagctcagactcg
cgtgtgtctcaggagtgtgtcgaaggatcagactccatctctgtagtaacccctcaccta
ctgtcagctgtgtgtgggttactaaccaacctgctgtgtgttctgccggaatttacacac
agcgcactgctagagaaccacatcctgcagggcctgctcagtgtgttggacgcagcggag
ttagagcgatgtctgactgaacttaacacacctgatctacttccatctgatgtagaggat
tccaggagccaggtgctgagaagtgtgtgttacgttcagagcgtgtgtaagctggtacag
gccgatgttgtgcacagtgaggattgtctctcccagtcagagctcattaaacctctgctg
aataacctcatctccatcctcacactgtctcacacacacctcgattctcaagtcttttat
caagtgttcctctgtatatcctcagatgtgcatacccagaatgcattgctgcacacctgg
acagatgtgtttatgctgctggcgattctgctgcgcaggaactacgctgcatgcggccca
catgtttgcgggactctggggaaactctggcaacgcttctcagacaccatccgtgcgtgc
gtggaccagtgcggtgcagatccgtcgctctacaccgtctcagcgcagttcctgtgcgtg
gtgttttctgaagaggcgaagaagcgagggacgagattagagcgatcggcttctctgacc
gccgctctgaattcccaatccggagagcaactgtgtgaattgctgctggagcagtatgat
aaaactccgttccagaaccctcttaagaaggtcacggctaaagtcctgatgcctctcctt
gcctgcagctccagcgctcagagttacgcctgcaaagcgggtctcatcgacagctgtgtg
gaacagatgaagcagatccactctcagcttcacctggagtctgtaagacagggcaaaacc
acacacaggaagaaggaggagaacagcaggaaggagctcaggatggtgctggagatcctg
aggaattgtctgtatcagcataaagagtgtaaagaagtagcgacagatttaaaactgtcc
tctgtggtgttgtctctttggccatggctccttctgaacgacccgggcatgatcgcagca
ttagaactgctctgtgtatacacggccaactgcactgcagcatgcagtgccgtatgtggt
agttcagttcacgctgctttacctagaaatcccgtgacgaacactctgatgcatgcggtg
atgaagttggcgtcgcaagttcctcctgataataacagcgtccatgctctttctttctct
ctgcttgctaatctgtctatctccagagactgcagaggcctcctacagaagagcaacttc
ctgcagcacttcctgtctctcccgatgcctcgggtgagcagtaaaggcagcacagcggca
gtggttctgtctcagtggctccagctgctgctgaacatctctttcgaggaagacggtcag
cagatgatcatgaagatgcgcggcgctctggagatgttaacggatctggctcagggcaaa
cacggagatcaaaaacgcacgtctctgctcatcctccacaacatctgcttctgctcagcc
aacaaacctcaagtcctcgtctgcgataaagctgtagagctgctcgtgtcatgtttggag
agcagctcattaaacacccgtgctctcggagcttctgcgctgtgggctttactgcacaac
tatcagaaggcaaaggtgaccctgaagtgtccctccatcagattgaaagtggacggagcg
tacacgctcgctaagaaaggtgcagagccaaaaacagaagagaacacgaacatatattta
ctaaaatgccttgaacacctcagccgtcttttaaacacatga
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integrated database retrieval system
