Ictalurus furcatus (blue catfish): 128599888
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Entry
128599888 CDS
T09387
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128599888 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ifu01007
]
128599888 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128599888 (gars1)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128599888 (gars1)
Enzymes [BR:
ifu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
128599888 (gars1)
Amino acid related enzymes [BR:
ifu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
128599888 (gars1)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128599888 (gars1)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128599888 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
DUF3993
DUF5915
Motif
Other DBs
NCBI-GeneID:
128599888
NCBI-ProteinID:
XP_053467895
LinkDB
All DBs
Position
23:complement(5761676..5772662)
Genome browser
AA seq
748 aa
AA seq
DB search
MLRRATSAVLRSGSQISAAAFLIRPLVKPQPLCAASNIRPFSLTSCLSKKKKKSLWLEQR
EGQNMDGTIEEILAPLRQAVKEQGDLVRQMKVGGAPDVDVTKAVAELKARKKVLEAKELS
LQAKDDVVDRVKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHFIH
EEQILEIDCTMLTPEPVLKTSGHVEKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKC
TQEKKGEMEDVITQMDNYTQQELADLFVKYNVKSPSTGNDLTPPISFNLMFQTSIGPGGN
MPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEI
EHFVDPNEKVHSKFSNVADLEVLLYSSKAQTSGQSAQIMKLGDAVEQGVINNSVLGYFIG
RIYLYLTKVGLAKDKVRFRQHMDNEMAHYACDCWDAEAKTSYGWIEIVGCADRSCYDLTC
HARATKVPLVAEKPLKEPKVVNVVQFEPNKGAIGKEYKKDAKLVMEYLAVCDECYITDQE
KLLSENGEFTIETEGKTFKLTKDMVSIKRFQKTLHVEEITPNVIEPSFGIGRIMYSIFEH
TFHIREGDEQRTYFSFPAVVAPYKCSVLPLSQNQEFMPFVRELSEAMTKFAVSHKVDDSS
GSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDTMRQIRAEVRELPEIVRDLAN
GTTTWAEIESKYPIFEGQETSKKDTAEE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggagagcgacgtcggcagtgttgcggagtgggtcccagatttcagccgctgcc
tttttaatccgccctttagttaagcctcagccgctctgtgctgcaagtaatatcagacct
ttctctcttacgtcctgcttgagcaagaagaagaagaagagtctgtggttagagcagcgt
gaaggacaaaacatggacggtaccatcgaggagattctagctccactgagacaagcagtg
aaggagcagggcgatctggtgcgtcagatgaaagttggcggagctcccgacgtggacgtc
accaaagctgtggcggagctcaaagctaggaagaaggtccttgaggcaaaggagctgtca
ctgcaggctaaagatgacgtcgtggacagagtgaagatggaggacacgttgaagagacgc
ttcttttatgaccaagcgtttgccatctacggaggcgtgagcggtctgtacgatttcggg
ccggtcggctgcgctctgaagaacaacatcctgcaggcgtggaggcagcacttcatccat
gaggaacagattctggagatcgactgcacgatgctcacgcccgagcccgtcctcaagaca
tcggggcacgtggagaagttcgccgactacatggtgaaagacgtgaagaacggagagtgc
ttccgtgccgatcatctcctgaaggctcatctgcagaagctgatgagtgacaagaagtgc
acgcaggaaaagaagggagaaatggaagatgtcatcactcagatggacaactacactcag
caggaactggctgatctgtttgtgaaatacaacgtgaagtcgcctagcaccggaaatgac
ctcacaccgcccatctcattcaacctgatgttccagacctccatcggacctggaggtaac
atgccaggctatctgaggcctgaaactgctcaggggatcttccttaacttcaaacgcctg
ctggagttcaaccagggcaagctgccatttgctgctgctcagatcggaaactctttcaga
aatgagatctctcctcgctcgggcctcattcgtgtcagagagtttacgatggctgagatc
gagcactttgttgacccaaatgaaaaggtgcattccaagttctccaacgttgccgatctg
gaggtcttgctgtactcgtccaaagcgcagaccagcggtcagtcggcccagatcatgaag
ctgggggatgcagtggagcagggtgtcatcaacaactctgtcctgggctatttcatcggg
aggatctacctctacctgaccaaagttggtctggcgaaagacaaagtacgtttccgtcag
cacatggacaacgagatggcccactacgcctgcgactgctgggacgccgaagccaaaacc
tcctacggctggattgaaattgtgggctgcgccgaccgctcatgctatgacctcacatgt
cacgcacgggctaccaaggtccccctggttgctgagaaacctctgaaggaacccaaagtc
gtcaacgtggtgcagtttgagccgaacaagggagccatcggcaaagaatacaagaaagac
gcgaagctggtcatggagtacctcgcggtgtgcgatgagtgttatatcacagatcaggag
aagcttctcagcgagaacggtgagttcaccatcgagactgaaggcaagaccttcaaactc
acaaaggacatggtgagcatcaagaggttccagaagacacttcatgttgaagagatcacc
cccaacgtcatcgagccttcctttggtatcggcagaatcatgtactccattttcgagcac
acattccacatcagagagggtgatgagcaaagaacgtatttcagcttcccggctgttgta
gcaccttacaaatgttccgtcctccctctgagccagaatcaggaattcatgcctttcgtg
cgtgaactatctgaagccatgaccaaatttgccgtgtcccataaagtggacgactcctcg
ggctccatcggaaggcgctacgccagaacggatgaaatcggtgtggcgtttggaatcact
atcgattttgacaccgtgaacaagacaccacacacggccactctgagagaccgcgacacc
atgcggcagatcagagctgaggtccgtgagttacccgagatcgtgcgagacctcgccaac
ggtaccaccacatgggctgagattgagagcaagtaccccatctttgaaggtcaagagacc
agcaagaaggacacagcagaagagtag
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