Ictalurus furcatus (blue catfish): 128599924
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Entry
128599924 CDS
T09387
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128599924 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128599924 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128599924 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128599924 (rb1cc1)
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128599924 (rb1cc1)
Membrane trafficking [BR:
ifu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128599924 (rb1cc1)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128599924 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
DUF3020
DUF6950
Motif
Other DBs
NCBI-GeneID:
128599924
NCBI-ProteinID:
XP_053467996
LinkDB
All DBs
Position
1:complement(2738118..2758448)
Genome browser
AA seq
1593 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSVENEMEMKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTASYQKLLLKFDVAYTNYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYRESLEKSSSPRPRTEAEPDVGEGRQTS
SQSAILCPTEVRQTSGGSAAQDGAVGRSSSSNCGLQEALEEEKEQDEADKMADAPSFNVT
LLDWINVQDRPNDVEAVVRKCFDSINRLDPRIIQPFLVECRDTITKLDNQNMKAIKGLED
RLYALDQMIASCKKLVNEQKELAQGFLANQMRAENLKDNSVLPDLCLSHANQLMIMLTNH
RKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELLERVRVVE
ALSTVPQMYCLAVVEVVRRKMFIKHYREWANALVKDGKNLYEAEKVKRETFGKLFRKSFL
RNRLFRGLDSWPPSSFCTRKPRKFDFELPDISLNDLQYLKSCCPAEVQPFLRVPSLCDFE
PLNHHTEALHQLVQAARSVDEMSQTITDLLSELKVSGSQSARRPSSESRTETMPTSSKTL
PALSIQSPPTQPLSLPAPLEDLSPDSIDAHTFDFETIGHPNMDPVLQQGSLDLDSLAESP
ESDFMSAVNEFVIEENVTSPNPISDPTSPEMMVESLYSSVINAIDSKRIQDTTMLERENS
RITKLKLTIDKYRSAAEESQSNMRKVKDDLCHFQGLVLKEQRDFGFALKKMSAEIHSVVN
NIRRRQEEELREAHQNELQKLKDDHAKHVLRLTDELEGNHKIVRDVQRAMLELEGLVERK
EKELAQMEGERERLLQEIRNSHQQAVQELERNLSEQSKALQDTLRSRDALADQLDGLQVE
IERKIRQEMENAEKNHLQDLEARLKNEHRAQMEILKRDSQGALDTLTLENQAKLKELAES
QLTERKKRESLIKDYEARIGELADTRCKLEMEMALKETETEDLRLQYEDAKNQQEEALKA
EMESRTKALREQVEALTQQLQKKNEEHEQGLAELRALMRLEKDHCISELVERHDEESTLL
RHEFSALKQKSQDAEKDREERLQEIQRQLEDQLVTLRKEREEEQRAFSDKELDLQTAVSD
LQAVNSLLSGQLEQERQEARRTVEEEKEALKHALLQKDELEAKLLGKIKLLEAQLEERQS
TDNYRGADAGDGKSVDVALQQRLDEERASLLGQLELLERKKNEELQNLKTLLIAEQQTNF
NTVLTREKLKKEQIINELSEKLKKVMLQQEKDKSLIESLSEDRATILQEKKHLEEELNRL
RSSALVSSAFFVPNPVAVAVEMPGAYGPVPAEVPVLPGLDSERLVSVAALRDDDRVDSAV
EASMMTVHDNAPMLSEEKQRILILERTLHMKEEENKRLSQRLMSQSMSSVSSRHSEKIAI
RDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLAALDLKPATGATRRPWVLGKVLE
KEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtacgtgttccaggtcaataacgggagcacgttgacgttcgacaccgaacta
gccgtgcaaactgttctggacctcaaacatgccatccaggctaagtacaagatcgccact
cagcatcaggtgctggtggttaatggcggcgagtgtatggtggccgagaggagagtgtgt
agctacagtgctggcacggatacaaaccccatctttttgttcaacaaagagatgatcttg
tgcgaccgtgcgccgacgatccccaaaaccaccttctccgtcgagaacgagatggagatg
aaggtggaggagtcgctcatgatgccggccgtgtttcacaccgtggcctcgcggacgcag
ctcgctgtggaaatgtttgaagttgcgaagaagctgtgctccttctgtgaacgcctggtc
cacgatgaacaccttcagcaccagggctgggctgccatcatggccaacctggacgactgc
accgcgtcctatcagaagctgctcttgaaattcgacgtggcctacactaattaccaacag
gatttcgaagacatcaaactgaagctgacaaagctcgggacggccgtctcggtcatggct
aagatcccgctgctggagtgcctgacccgccacagctacagagaaagcctggagaaatcc
tcttcgcctcgtcccaggaccgaggccgagcctgacgtcggagaaggacgacagacgtcc
tcccagtcggccatcttgtgcccgacggaggtccggcagacttcaggaggctctgcggct
caggacggagcggtggggaggagcagcagcagcaactgcgggcttcaagaggcactggag
gaagaaaaggagcaggacgaggcggacaaaatggcggacgctccttcgtttaacgtcacg
ctgctggactggatcaatgtacaggaccgacccaatgacgtcgaggctgtagtgaggaag
tgcttcgactccatcaacagactcgatccgcggattattcagccgtttcttgtcgagtgc
cgggacaccatcaccaaactggataatcaaaacatgaaggccataaaggggctcgaagac
agattgtacgcactcgaccaaatgatcgccagctgcaagaagctagtgaacgaacagaag
gagctcgctcagggatttttagccaatcagatgagggctgaaaacctgaaggacaactcg
gtgctgccggacctgtgtctgagtcacgccaatcagctgatgatcatgctgaccaaccac
aggaagctgctggacattaagcagaagtgcacgactgccaaacaggaactggccaacaac
ctgcaagtccgtctcaaatggtgctgctacgtgatgctgcatgcggatcaggatggcgag
aagctccaagcgctgctgcgcctcctgaccgagctgctggagcgagtgcgcgtggtggaa
gccctcagtactgtcccgcagatgtactgcctggccgtggtggaggtggtgcgccggaaa
atgttcattaaacactacagagagtgggccaatgccctggttaaagatgggaaaaacctc
tatgaggcagagaaggtcaaaagggagacgtttggcaagctgttcagaaagtcgttcctc
agaaatcgcttgtttcgaggactcgactcatggcctccctcgtcgttttgcacaagaaag
cctcgcaagtttgactttgagcttccggacatttctctgaacgacctgcagtatctgaag
agctgctgtcctgctgaagtgcagccttttctcagggttccatcactatgtgattttgag
ccattaaaccatcatacagaagctcttcaccagctggtacaagcagctcggagtgtagac
gagatgtctcaaaccatcacagacttactgagtgaactgaaggtttctgggagccagagt
gcacggagacccagctcggaaagcagaacagagaccatgcccacctcatctaaaaccctt
cctgccctcagtatacagtctccacccactcagcccctctcccttccagctccattagaa
gatctgtcccctgacagtatagacgcccatacgtttgactttgaaaccataggacacccc
aacatggatcctgtgctccagcagggctctctggacctggactctttagccgagagcccg
gagtcagacttcatgtcagcggtcaatgagtttgtcatcgaagagaatgtaacgtcaccc
aatcccatcagtgatcctacaagtcctgagatgatggtcgagtctctttactcctctgtc
atcaatgctatagatagcaaaaggatccaggacacgaccatgctcgagagagagaactcc
agaatcacgaagctcaagctgaccatagacaagtaccgttcagctgccgaggagtctcag
agcaacatgaggaaagtcaaggatgacctctgtcatttccaaggacttgttttgaaagag
cagcgggactttggcttcgccttgaagaagatgagcgcagaaattcacagcgtggtcaac
aacatcagacgtcgtcaggaagaggaactccgagaggcacaccagaacgagctccaaaag
ctgaaagatgatcacgcaaagcacgtcctccggcttactgacgagttggaagggaaccac
aagatcgtccgggacgtccagagggccatgctcgaactcgaagggcttgtggaaaggaaa
gagaaagagctggctcagatggagggcgagagagaacgcttactccaggagatacgcaac
agccaccagcaggctgtccaggagttggagaggaacctttcagagcaaagcaaggcactt
caagacaccttgcgttccagagacgccctcgccgaccagctggacggcctgcaagtcgag
attgagaggaagatacgccaagaaatggagaacgcggagaagaaccatctccaagacttg
gaagctcgtctgaaaaatgagcacagagcgcaaatggagatcctgaaacgtgatagccag
ggtgctctagacaccctaacccttgagaaccaagccaaactaaaggaactcgcggaatcg
caattgacggaacggaagaagcgcgagagcctcatcaaggactatgaggcacgcatcggt
gagctcgccgacactcgatgcaagctggaaatggaaatggctcttaaagagaccgaaacc
gaagacctacgcttgcaatacgaggatgccaagaaccagcaggaggaggcacttaaggcc
gagatggagtcacggacgaaggccctccgggagcaagtcgaggcgctgacgcagcagctg
cagaagaagaacgaggagcatgagcaaggcctcgccgagctgcgcgctctcatgcgcctc
gagaaggaccactgcatctcggagctggtggagcggcacgatgaggagagcacgctgctg
cgccacgagttctccgcgctcaagcagaaatcgcaggacgccgagaaggaccgcgaagaa
cgcctacaggagatccagcgccagctggaggaccagctcgtgactttacgcaaggaacgg
gaggaggagcagagggcgttcagcgataaagagctcgacttgcaaaccgccgtcagtgac
ctgcaggccgtaaactcgctcctgtcagggcagctggagcaggagcgtcaagaggcccgc
agaaccgtagaggaggagaaagaggcgctaaaacacgccttactgcagaaggacgagctg
gaagcgaagctgttagggaaaattaaactactcgaagctcaacttgaggaaagacaatcc
actgacaattacagaggagctgacgccggagatggaaaatctgtggacgtcgcattgcag
cagaggttggatgaagaacgagcgtcccttctgggccagctggagctgctggagaggaag
aagaacgaggagctgcagaatctgaagaccttgctgatcgctgagcagcagactaatttc
aatactgtactgacgcgagagaagttaaagaaggagcagatcatcaacgagctgagtgag
aagctgaagaaggtcatgctgcagcaggagaaggataagagcctgattgagtctctctcc
gaggaccgagccaccatcctgcaggagaaaaaacacctagaggaggagctcaaccgcctc
cggagctccgccctcgtctcctccgctttctttgtgcccaatcccgtcgccgttgccgtg
gagatgcccggagcgtacggacctgtccctgctgaagtccccgtcctgcctggtctggat
tcggagcggctggtgtccgtggccgcgctgcgagacgatgaccgggtggactctgctgtc
gaagcgagcatgatgacagtccatgataacgcgccgatgctgtctgaggagaagcagcgg
atactgattttggaaagaactctacacatgaaagaagaggagaacaagcggctcagccaa
agactgatgtcacagagcatgtcgtccgtatcctcgaggcattcggagaaaatcgccatt
cgagattttcaggttggcgatttggtcctcataatcctggacgagcggcacgataattac
gtgctgttcaccgtcggccccactctctacttcctgcactcggaatctctcgctgcgctg
gacctcaagccggcgactggagctacgaggagaccctgggtcctggggaaggtcctggag
aaagaatattgccaggcaaaaaaggcccaaaaccgcttcaaagttcctttgggcaccaaa
ttctaccgagtaaaagccgtgccatggaataagaaggtgtaa
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integrated database retrieval system
