Ictalurus furcatus (blue catfish): 128599943
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Entry
128599943 CDS
T09387
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
128599943 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ifu03051
]
128599943 (psmc4)
Proteasome [BR:
ifu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
128599943 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
RuvB_N
nSTAND3
AAA_22
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_lid_PRS2_C
AAA_3
IstB_IS21
TsaE
AAA_7
AAA_33
Parvo_NS1
AAA_18
NB-ARC
AAA_25
AAA_17
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
128599943
NCBI-ProteinID:
XP_053467989
LinkDB
All DBs
Position
23:complement(20526237..20530961)
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AA seq
418 aa
AA seq
DB search
MEDGGVIVERAPDDVPAMLSSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRLIFTTITSKMNLSEEVDL
EDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcggagtgatagtcgagagggctccggatgatgtcccagccatgctgagc
tcacggcctcagaccggtttgtcctttttggccccagaacctgaggatctggaagatctg
tacagcagatataagaagctgcagcaggagctggagtttttggaggtgcaggaggagtac
attaaggatgaacagaagaacctgaagaaggagttcctccacgctcaggaggaggtgaag
aggatccagagcatcccgctggtcatcggacagttcctggaagccgtggaccagaacacc
gccatcgtgggttccactacagggtcgaattactacgtgcggatcctgagcactatagac
agagagctgctgaagcccaacgcctcggtggctctgcacaaacacagcaacgctctggtg
gacgttctgcccccggaggccgacagcagcatcatgatgctcacctcggatcagaagccg
gatgtgatgtacgctgatatcggagggatggacatccagaagcaggaggtgcgggaggcc
gtggagctgcccctcacacactttgagctctataagcagattggtatcgaccccccgaga
ggagtactgatgtacgggccgcccggctgtgggaaaaccatgctggcgaaagccgtggct
caccacaccacagcggcgtttatccgcgtcgtgggctcagagtttgttcagaagtacctg
ggtgaagggccgcgtatggtcagagacgtgttccgattggccaaagagaacgcacctgcc
atcatcttcatcgacgagatcgacgccatcgccaccaagcgcttcgacgctcagaccgga
gctgaccgagaggtgcagagaatcctcctggagctcctgaatcagatggacggattcgac
cagaatgtcaatgtgaaggtgatcatggccactaacagggccgacactctggacccggct
ctgctgcgtccaggtcgtttggaccgtaagatcgagtttcctgtgccagaccgcagacag
aagcgccttatcttcaccaccatcaccagcaagatgaacctgtctgaggaggtggacctg
gaggactatgttgctcgacctgacaagatctctggagcggatattaactctatctgccag
gaggctggtatgctggccgtgcgtgaaaaccgttatatcgtcctggccaaggatttcgag
aaggcttacaagacggtgatcaagaaggatgagcaggagcacgagttctacaagtag
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