Ictalurus furcatus (blue catfish): 128599945
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Entry
128599945 CDS
T09387
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128599945 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Other domain-containing proteins
Patched domain-containing proteins
128599945 (ptchd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
128599945
NCBI-ProteinID:
XP_053467990
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All DBs
Position
23:complement(9288845..9303928)
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AA seq
888 aa
AA seq
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MLRQVVREGLRASFYKLGHFVANHPVFFASAPVLLSVLLGASFSRYRVEEEVERLLAPKH
SLAKIEGNLVDSLFPVNRSKHTLYSDLQTPGRYGRVIVTSRRGSVLEPHNVDLVLKLHSA
ITHIQVPMLGFNYTFAHLCLLDDSKNCIIDDILRMLEEMRTARVSNRTVPLLRYPITRLK
DGREAYVGHQLGGVQTVGSGREGVRAARALQLTYYLQVASALNEVVATRWELLFCRELES
FSAAHPELGLYPFTSSSLQRDFQRTSRVSERPLLFSLAACLSLAVLCSSMRDCVRTKPWL
GILALVTVSLATLTSAGIFNLTGGKYNSTYLGIPFIMLGHGLFGTFEMLSSWRRTREDQH
VKERVAAVFSDCMLPFTASTALHLVTFGIGASPFTNIEAVRLFCRIACISILFNYLYILT
FYGSNLVFAGYLENSYRHSLFCRRVPKPDLLQQKPAWYRFLMYTHYNEDASESGDLRVYE
NHLLVAFMKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNVVATETSTI
AYTRAQQRYFSSYSPVIGFYIYESIEYWNTSVQDDLLEYTKGFERISWFESYLNYLHGLN
ITTSLSRRNFTEHLRSGFLRQPRYLHFSDDIIFAKRTDGEFDVVASRMFLVAKTTENKRE
EMSVLLDTLRKLSLTSRVKFIIFNPSFVYMDRYASSVGAPLKNSCIAALFLLFFSSFLAA
DPLVNAWITVTVASVEFGVVGFMTLWQVELDCVSVLCLIYGVNYAVDSSVPLVSAFALGR
ESTRTRWVKVSLERHGVPALQSYMCYGAALLPLAAVPSNLTHTLFRCFFLTALITAFHCL
AILPVLLTFLPPSKKKRRERKSMAEHQEEIECVEMADSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaagtggtgcgcgaggggctgcgggcgtccttctacaagctgggccacttc
gtcgccaaccacccggtgttcttcgcctcggcgcccgtgctcctctcggtgctgctcggc
gccagtttcagcaggtaccgtgtggaggaggaagtggagcgcctgctggcccccaaacac
agtctggcgaagatcgagggcaacctggtggacagcctgttccccgtcaaccgctccaaa
cacaccctctactcagacctgcagacacccggcaggtacgggcgtgtgatcgtgacctcg
cgcaggggcagcgtgctcgagcctcacaacgttgacctcgtcctgaagcttcacagtgcc
atcacccacatccaggttccgatgctgggcttcaactacacctttgctcacctctgcctg
ctggacgatagcaagaactgcatcatagacgacatcctgcgaatgctggaggagatgcga
acagcccgcgtctcgaaccggaccgttccgctgctgcgctaccctatcacacgactcaag
gatgggcgagaggcttacgtcggacaccagctcggcggggtgcagacggtgggcagtggt
cgagaaggtgtccgcgctgcccgtgctctccagctcacctactacttgcaggtcgccagt
gcgctgaatgaggtggtggcgactcgctgggagctgctgttctgccgtgagttggagagc
ttcagcgcagcacaccccgagctcgggctgtacccgttcacctcgtcctcgctgcagcgg
gactttcagaggacaagtcgcgtatccgaacgcccactgctcttcagcctggctgcatgc
ctctcgctcgctgttctttgctcttctatgagagactgcgtacgcaccaaaccctggttg
ggaatcctggcgttggtcaccgtcagcctcgcgactctcacctccgccgggatctttaac
ctcactggaggaaaatacaactccacgtaccttggcattcctttcatcatgctgggtcat
ggcttgtttggcacattcgagatgctgtcttcctggcgacggacccgtgaggaccagcat
gtaaaagagcgagtggctgctgtattctcagactgcatgcttcctttcacagccagcacc
gcccttcaccttgtcacctttggcatcggtgccagcccgttcacgaacatcgaggccgtg
cgcctgttctgccgcattgcctgcatttccatcctcttcaactacctctacatcctcacc
ttctatgggtctaacctggtttttgcaggttacctcgaaaacagctatcgtcacagcctg
ttctgcaggcgcgtacccaagcctgatttactgcaacaaaagccagcttggtatcgcttc
ctgatgtacacgcattacaatgaggacgcgtctgaatccggtgacctacgtgtctatgag
aaccatctcctggtggccttcatgaagcgctactattgtgactggattaccaacacttat
gtcaaaccctttgtagtgcttttttatttagtatacatctcctttgcattgatgggttat
ttacaggtgagtgaaggctcagatctcagtaacgttgtcgctacagagaccagcaccatc
gcgtacacccgggcacaacagcgctactttagtagttacagccctgtgattggtttctac
atctatgaatctatcgagtactggaacaccagtgtacaggacgacctccttgagtacacc
aaagggtttgagcgaatctcctggtttgagagttacctaaactatctgcatggtctaaac
ataacgaccagcctttcgcgcagaaacttcacagagcatctgcgctcaggcttcctccgc
cagccccgctacctccatttctcagacgacatcatattcgccaagcggaccgatggagag
ttcgacgtagtggcttcccggatgttcctggtggccaagacgacggagaacaagcgagag
gagatgtctgttttgttagacacactgcgcaagctctcactgacctccagggtgaagttc
atcatcttcaacccttcttttgtgtacatggaccgctacgcatcatcagtaggtgcgccg
ttgaagaactcatgcattgctgctctgttcttgctcttcttttctagttttttggcggcc
gatcctctggtgaacgcctggataactgtgacggtggcctctgtggaatttggtgtggtg
gggtttatgacactgtggcaggtggagttagactgcgtgtcagtgctgtgcctgatttat
ggggttaactacgccgtggactcaagcgtgcctctagtgtcagccttcgctctgggacgg
gaatcgacgcgtacgcgatgggtcaaggtgtccctggagcggcacggggtccctgctttg
cagagttacatgtgctatggggcagcattgttgcctttagcagctgttccatcaaacctt
actcacacgctattcaggtgttttttcctcactgccctcatcaccgccttccactgcctg
gctatccttccagtcctcctgacattcttacccccctccaagaaaaagaggagggaaagg
aaaagcatggctgagcaccaggaagagattgaatgcgtcgagatggcagacagtacccga
gtggtcgatcagattaccaccgtctga
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