Ictalurus furcatus (blue catfish): 128600269
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Entry
128600269 CDS
T09387
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04120
Ubiquitin mediated proteolysis
ifu04137
Mitophagy - animal
ifu04144
Endocytosis
ifu04340
Hedgehog signaling pathway
ifu04350
TGF-beta signaling pathway
ifu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128600269 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128600269 (smurf1)
04350 TGF-beta signaling pathway
128600269 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128600269 (smurf1)
04137 Mitophagy - animal
128600269 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
128600269 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128600269 (smurf1)
04121 Ubiquitin system [BR:
ifu04121
]
128600269 (smurf1)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128600269 (smurf1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128600269 (smurf1)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128600269 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
128600269 (smurf1)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
HECT type E3
128600269 (smurf1)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128600269 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
128600269
NCBI-ProteinID:
XP_053468595
LinkDB
All DBs
Position
24:complement(10464493..10515877)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNASDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENEGPVFEDSGPGRPLSCFMEEPL
PYSDPTGAAGGGNCRALESPNQEQRLQTQRIRNQESRSHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQQSQVKESSQALPVQMDVPVEEGEGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLSDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGRNVPVTEENKREYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDHK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtcaagcatcaaaatcagactgacagtatta
tgtgccaagaatctagcaaagaaagacttcttccgattgcctgacccttttgccaaagtt
gttgtcgatggctcaggccagtgtcactccacagacacagtgaagagcacactggaccct
aaatggaaccagcattatgatctatacatcgggaaaacggactcgatcactattagcgta
tggaaccataagaagatccacaagaagcagggtgctggtttcctgggctgcgtgaggctc
ctgtccaacgccatcagcagactcaaagatacaggctaccagcgtttggatttatgcaag
ctgaacgcctccgacagcgacgccgtccggggtcaaatagtcgtaagcctccagactcgt
gacaggattggcagtggcgggcctgtggtagactgtcgaggactgttagaaaatgaaggg
ccggtctttgaggactctggaccagggcggcctctcagctgtttcatggaggagcctctg
ccctactcggaccccacaggggctgctggtgggggcaactgtcgtgcgctggagtcacct
aatcaagagcagaggcttcaaacccagagaatccgaaaccaggagtctagaagtcacgct
cacaccccacagaaccggccacatgggcaccagtcaccagacctcccagaaggctatgag
cagaggaccaccgtgcagggacaggtgtacttcctacacacacagaccggcgtgagcact
tggcacgatcccagaataccacgggatctgaacagcgtgagctgcgaggagctcggacct
ctgccgcccggctgggagatccggagcacggtgtcaggacggatttattttgttgaccac
aataacagaaccacacaattcacagaccccaggttacaccacatcatgagccaacagtct
caggtgaaggagtcgagccaggctctgccagtgcagatggatgttcctgtggaggagggt
gaaggagagctgccagtgcgttacgagcgggatctcgtccagaagctgaaggtgctgcgt
cacgagctctcgttgcagcagcctcaggctggacactgccgcatcgaggtgtcccgtgaa
gaaatctttgaggagtcttaccgtcagatcatgaagatgaggccaaaggacctgaagaag
aggctcatggttaaattccgtggagaagaaggcttagattacggtggcgtggcaagggag
tggttgtacctcctgtgtcacgagatgcttaatccctactacggcctgttccagtactcg
acagataacatctacacgctgcagatcaaccccgattcgtccatcaaccctgaccacttg
tcgtacttccactttgtggggaggatcatgggccttgctgtgtttcatgggcactacata
aacggaggcttcacgctgcccttctacaagcagctcctggggaaacccatccagctttct
gacctggagaccgtggaccccgagctccacaagagcctcgtctggattctagagaatgac
atcacatctgttctggatcatacgttctgcgtagaacacaacgctttcggcaaattcctc
cagcatgagcttaagcccaacggcagaaacgtcccagtgacggaggagaataaaagggag
tatgtgaggctctacgtgaactggaggttcatgcgaggcatcgaggcccagttcctcgct
ctgcagaagggcttcaacgagctcatcccacagcacctgctcaagccttttgaccacaag
gaactcgagctgatcatcggaggactcgggaagatcgacttgaacgactggaaggccaac
acgcggctaaagcactgcgtggctgacagtaacatagtgaagtggttttggcaggcggtg
gagtcgttcgacgaggagaggaggggaagactgctccagttcgtcaccggctccacacgc
gtccctcttcaaggctttaaagcactgcaaggttctacaggttctgcaggaccaaggctc
ttcactatccacttgattgatgccaatacggataatttgcccaaagcgcacacgtgcttc
aaccgcatcgacatcccgccttacgagtcatacgagaagctctatgagaagctcctgact
gccgtggaggagacgtgtggctttgccgtggagtga
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