Ictalurus furcatus (blue catfish): 128600282
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Entry
128600282 CDS
T09387
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128600282
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
128600282
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
128600282
NCBI-ProteinID:
XP_053468614
LinkDB
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Position
2:complement(28053840..28090408)
Genome browser
AA seq
1978 aa
AA seq
DB search
MFESFEKRSTLAEDMQSFRERGGFQGNQRCYQQEPHELSRLENYRHHSQTGQGYEVHALS
AAGMPTAGTSSKDCYGQQPYPSYGSSSAQSKKPYRGGKAPSQHLQAGYSSHMNSGYSSQY
MSEGHLQQKWDESSQISQYEQDIVGHLEPGASGASQYLEQNMLAISQSQCHLPSQPSAPV
YTSPHQQGHPPNPTPSPLMYPQSHIHFPQHSQPPSSTSSSYLEKCNPIPHGYKSGYGMPP
NAQYSRQMGNHSSLKQSSYRPQNNYGYQQPPSRGGFEQQASLQGMSGTPESLQKFPHYNQ
PQQNYCITDLSVRSPEQYYQNCSPSSSHSPARSVGRSPSYSSTPSPLMPNPDTFQYGQPI
NPSSSSVNLQDPSMLMPPHTHPSPSVNHQSQSYSSSMKDRFSEKLFSNPSLWSLNALTSQ
VENISNNVQQLLLSEALMANKKGNKRNPPKKGEEYRGNLKAMEDSSCPDSQQGPLPSDSY
STPRSMPADLLEVGYSSSTEDQMERNYYYFGQGKGPTHASAHSQLSLDAVSTCSMNSTDD
MSVRSGDSDRSIHSAASEDNLSCDPRVQRVPFGEEQHSSLRNIRNERSPISVTAPSPMKQ
ESNSPIGIKQSESTQKENFEESAWTERITDEKEIGKMKLATEHKCKGEVFEASEKRQEWL
EDEKCPTFFHKLNKEVSNESYSYETEDSIYQKLKNKYETEEDDFAGKCCDTSSKGNEDSE
KKSEMFKSQNNGEDPITASPAISKDVPESNLYLPRKEENSETTHLTSECESSKERLSTSE
RQNDVFEEQQSALSYSVSEVREKGSLTSNEDVINNKAKLEEFSSEACNNQGETASGPLCV
NTEIAETHAQDIAHRSSERTCDIAPQSHTVRSGFSALNEKTTPQNQARDHIDHNDAKVLE
PDSPQLPGKSIISSAPSWADTPPSPQKGDEDVEPGLSCPSATKPEPMAPSAHPRLLGRKH
ARGRRRLIHSNVGMRNVERDEAPPSPQKSSMLSSNSAILSDRMEAVQLDISSQTPKLLTE
GLPSRMCTRSLGSQSTPKVCSQERRKPGPKPSSKPGPKPVTKPGLKPSSKPVLKPGPKQG
LKPGPKPGPKPSPKPGAKPSLKSGPKQNSKPGPKPVAVPSVKPSPKPGPKPAAIPALKPS
PKPGLKPSPKPGLKSTEGVTPKGPGRPKGLTSRIKSMKYENNIDAITEHIEDTSCISENP
EQQENTAVTLETVVGTTLRTSIESTIGSTLDTALDVSFVNSVAKDQKSMVLRSRKQTREK
TTEDKEKERDTSTETSAIKPIESHIQKVAAAQPCENLTSTLISSNHEDICTDSLSQLNEQ
IVSVSIKRKSSLQVPDPVKKKKGLKVSQTKTREPQPEELVLEAQGSKGRRKRGIKLEPSA
CSTLTKDNVPLEDISDTPCVAPQCPTKTKYLPPRKGRGLKYEAMVQKITSPASKKQPLNI
QPDVVLEELATKPSPELHVTEKRKTVNTTMVTPEEGESTVSIEETPDTAGIQTPRKKRRK
WATVESTDTPDIALETGSLIINTPRLAKQRAIKNNHEMHLKQRKKRRKSTELAKSVPIVE
THEQTNVFISPAAPPPSPPPTSSLILNTEQKTQIEQLSIEIGSTVIKPKRGRRPSLKKKQ
EDFSQQIGNEEGQKVKKKPGPKKKIQQNNNGTIKVTVKRLKTKLKCKKECIPTVKGIVSD
FLKMQESEGKHSFKPYVRIDSSKKLASLCTIINKPEEEHLLIQTRKKNLEKNKTIPNSSI
MLQGPLVNRSLTDRCLICCLCGKPANYRELGDLCGPYYSENNIPRKTLSLTYHEDFRQNR
DREQDKVAMCSAEQLNDMKREGEKDLLQEGTSEGDCRQVMRERRAQLKSHLGLRARFKRL
QLLQGRAGGRVPPAGEEGSYSVLQRLQLEAEVNEHWAHESCAVWTSGVILIAGKLCGLKE
AAQESTLTKCSKCQSEGASISCSWKSCIHKYHYVCAKETGCTFDEDTFSIKCPKHQAM
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatcctttgaaaagaggagcaccctagctgaagacatgcagtccttcagagag
cggggtggtttccagggcaaccagcgctgctatcagcaggaaccccatgaattatctcgc
cttgagaattacagacatcacagccagaccggacagggctatgaggtgcacgctctttct
gctgcagggatgccaacagcaggaacaagctctaaggactgttatgggcagcagccctac
cccagctatggcagcagttcagctcagagcaagaaaccatacagaggaggaaaagctcca
agccagcacctgcaggctggctacagtagccacatgaattctggatattcatcccagtac
atgagtgagggacacttgcaacagaagtgggatgagtctagtcagatatctcagtatgaa
caggacattgtgggtcatcttgagcctggagccagtggtgcatcccaataccttgagcag
aacatgctagccatttctcaaagccagtgccatctcccctcccaaccctctgcacctgta
tatacaagcccccatcagcaaggtcatcctcccaatcctactccatctccattaatgtac
ccacagagccacattcatttccctcaacactcccaaccaccctcctccacctcatcatct
tacttggagaaatgcaatccaattcctcatggctacaaaagtggctacggaatgccacct
aatgcccagtattcaaggcagatgggtaaccacagtagtctgaagcagagcagctatcgg
ccacagaataattatggctaccaacagcctccttcaagaggtgggtttgaacagcaggct
tccttgcagggaatgtcgggtacaccagagagtcttcaaaagttcccacattataatcag
ccccaacaaaactactgtataacagatctttctgtgaggtcacctgaacagtattaccag
aactgcagtccaagctccagccactcacctgcaaggtctgtgggtaggtcaccctcatat
agctccacaccttctcccttaatgcccaatcctgacacattccagtatggccaaccaatc
aacccttcctcttcttctgtgaatctacaagatccaagcatgttaatgcctccacacacc
cacccatccccaagtgttaatcaccagtctcagagctactccagttctatgaaggaccgt
ttttctgagaagcttttttctaacccgagcttgtggagccttaatgctttgacatctcag
gtagagaacatctccaacaatgtccaacaattattgctctcagaagctcttatggccaac
aaaaaaggtaacaagcgaaatccgccaaaaaagggagaggaatataggggtaacttaaag
gcaatggaggactcttcatgtcctgatagccaacaaggtcctctccccagtgattcttat
agcacccctagatctatgccagctgatctactagaagtaggatactccagcagcactgaa
gatcagatggaacgtaactactactactttggtcagggcaaaggtccaacacatgcttca
gcacattctcaattgagtctggacgcagtttctacctgctccatgaactcaacagatgac
atgtctgtcaggtcaggtgactcagatcggagtatacatagtgccgcctctgaagataat
cttagctgtgaccctagggtgcagagagtgccatttggagaggagcagcacagttctctt
agaaacattagaaacgaaaggtccccgattagtgtaacagctccaagcccaatgaagcag
gaaagtaattctccaataggcataaagcagtctgagagtactcagaaggagaattttgag
gaatctgcctggactgagaggataactgatgaaaaagaaattgggaaaatgaagctggcc
acagaacataagtgcaaaggagaagtttttgaggcatctgagaaacgacaggaatggtta
gaggatgagaagtgccccaccttttttcataagttaaataaagaagtgtcaaatgaaagc
tattcttatgaaacagaagacagcatctatcagaaactgaaaaacaaatatgagacagag
gaagatgactttgctgggaagtgttgtgacaccagcagcaaaggaaatgaagattcagaa
aagaaatctgaaatgttcaaatcacagaataatggtgaggaccctataacagcatcacca
gctatttcaaaagatgtgcctgagtccaatctatatttgcctaggaaagaggaaaactca
gaaacaactcatctcacctctgagtgtgaatcttcaaaggaaagactgtcaacctctgag
agacagaatgatgtctttgaggagcaacagtctgccctatcctattcagtctctgaagta
agagagaaaggaagtctgacatccaatgaagatgtgattaataataaagcaaaactagaa
gagttctcttcagaggcctgtaataatcaaggggagacagcaagtggaccactttgtgtc
aacaccgaaatagctgagacccatgcccaagatatagcccacagaagcagtgaaaggaca
tgtgacattgcacctcagtctcacactgtcaggagtggcttctcagctctcaatgagaaa
acaacacctcagaatcaggcgagggatcacattgatcacaatgatgcaaaagtgctggag
cctgactcccctcagttgccaggcaagtcaataatatcttctgcaccatcttgggctgat
actccaccatccccacagaaaggtgatgaggatgtggaaccaggtttaagctgtcccagt
gcaacaaaaccagagcccatggccccttctgcacatccaagactattgggcagaaagcat
gcaaggggtaggagaagattaattcattcaaatgtagggatgaggaatgtggaaagggat
gaggctccaccatctcctcaaaagtccagcatgctctcaagtaacagtgctatcttatct
gatcggatggaggctgttcagctggacattagcagtcaaacaccaaaacttctgacagaa
ggtttaccatcccgtatgtgtactcgttctttagggtcgcaaagtaccccaaaggtttgt
tctcaagagagaagaaaaccaggtccaaaacccagttcaaaaccaggaccaaaacctgtc
actaagcctggcctaaaacctagttcaaagcctgttttaaaaccaggtccaaaacaaggc
ctaaaacctggaccaaaaccaggaccaaagccaagtcccaaacctggtgcaaagccttct
ttgaagtctggtccaaaacagaactcaaaaccaggtccaaaacctgtggctgtgccaagt
gtaaaacctagtccaaagcctggcccaaagcctgctgctatacctgctctgaaacctagt
ccaaaacctggtttaaagcctagtccaaaacctggtttaaagtccacagaaggagtaaca
cctaagggccctggtcggccaaaaggcctcacctccaggatcaaatcaatgaaatatgaa
aataatatagatgccatcacagaacatatagaagatacaagctgcataagtgaaaaccct
gaacaacaagaaaatactgcagtcactctggaaactgttgttggtactactttgcgcact
tcaatagaaagcacaataggttccactttggacactgcattggatgtttcttttgtaaat
tctgtagcaaaggatcagaagtccatggtattaagatctcggaagcaaacacgggaaaag
acaacagaagacaaggagaaagagagagacacatcaactgagacatcagcaataaaaccc
attgagtcacatatacagaaagtggctgctgctcagccctgtgagaacctaacatcaacc
ttaatatcatccaaccatgaggatatctgcacagattcacttagtcaacttaatgagcag
attgtgtcagtttcaatcaagagaaaatctagtttacaagtcccagaccctgtcaagaaa
aagaaaggtctgaaagttagtcaaacaaaaacacgggaacctcagccagaggagttagta
ttggaagcccaaggatcaaagggaaggcgaaagcgaggcattaaattagaaccatctgct
tgcagcactttgaccaaagataacgttcccttggaagatatcagtgacacaccttgtgtg
gctcctcagtgtcctactaaaacaaaatatctgcctcctaggaaaggcagaggactaaaa
tatgaagcaatggttcagaaaatcacatccccagcatccaaaaaacaacctctaaatatc
cagccagatgttgtgctagaagagttagcaacaaagccatcaccagaactacatgtaaca
gaaaaaagaaagacagtaaacactacaatggtaacaccagaggagggtgagagtacagta
agcattgaggagactccagacacagcaggtatccaaactcctcgaaagaagcgcagaaag
tgggccacagtggagagcacggacacaccagatatagcattggagactgggagcctcatt
atcaacacaccaaggctagccaaacagagagccattaaaaataaccatgagatgcatcta
aagcagcggaagaagagaagaaaaagcaccgagcttgcaaagagtgtgccaattgtggaa
acacatgagcagactaatgtgttcatctctcccgcagcacctccaccatcaccaccacca
acatcctcactcattctaaacacagaacagaagacacagattgaacagctttcaatagaa
ataggctcaacagtaattaaaccgaaaagaggcaggcggccatcacttaaaaagaaacag
gaagacttcagtcagcaaataggaaatgaagaaggtcaaaaggttaaaaaaaagcctggg
cctaaaaaaaagatccaacagaataacaatggcaccatcaaggtcaccgtaaagagactt
aagactaaattaaaatgcaaaaaggaatgtattcctactgtgaaagggatagtgtcggat
tttttaaaaatgcaagaaagtgaaggtaagcattctttcaaaccatatgtacgcattgac
agctccaaaaagcttgcttccctttgcacaatcataaacaaacctgaggaagagcatctg
ctcatccagacaagaaaaaagaacttggaaaaaaacaagacaataccaaactcatcaata
atgctccagggccccttagttaacagaagcctaaccgacaggtgtctaatatgctgcctg
tgtggaaagccagcaaattacagagagcttggggatttgtgtggcccatactactctgag
aacaacataccacggaaaacactgtctttaacgtaccatgaagacttcaggcaaaacaga
gacagagagcaagacaaggtggccatgtgcagtgctgagcaactcaatgatatgaagaga
gagggagaaaaagacttacttcaggaagggacaagtgaaggagattgcaggcaggtgatg
agagaaagaagggcacaacttaaaagtcatcttggcttgcgggcgaggttcaaaagactg
cagctgttgcaagggagagctggtggaagagttccccctgctggtgaggagggctcttac
tctgttctacagaggttacagctggaggctgaggttaatgagcactgggcacatgagtcc
tgcgctgtctggaccagtggtgtgatcctcatcgcaggcaaactttgcggacttaaggaa
gctgcacaggaatctacactcacaaaatgctctaagtgccagagtgaaggagcctccatc
agctgcagctggaaaagctgtattcataaataccactatgtctgcgccaaagagacaggc
tgcacattcgatgaagacactttctcgataaaatgtccaaaacaccaggctatgtaa
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integrated database retrieval system
