Ictalurus furcatus (blue catfish): 128600320
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Entry
128600320 CDS
T09387
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128600320 (snx13)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128600320 (snx13)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
DUF2972
HipN
Rep3_C
Motif
Other DBs
NCBI-GeneID:
128600320
NCBI-ProteinID:
XP_053468665
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All DBs
Position
24:5518304..5556033
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AA seq
989 aa
AA seq
DB search
MGNLVTVTSYRASDGTCDYVYLHPCLQCDPLGTLFNLRQASLSVWGWGGLGILLFLITFG
PFAIFYLAFYIFCFLGGGFAVTLLFGKTNSEKHLEKCEHSYLPPTPTGIAKTLEELKQET
KPIKIDRRLTGSNFIDEPLQQVIQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFS
TRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLNEREDPKQREAPEELLDAFFETEVEM
ERKICRDVVCTSHGDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLIN
QLSDPDYINQFIIWMIRDSSCNYEAFMNILKLTDKTAELEAVKDKVLEELQYLRSLDTAG
DDINTIKNQINSLLFVKKVCETRIQRLQSGKDVDAMKLAANFGKLCIIPLDHILVHNIAL
QFFMDYMQQMGGQADLFFWLTVEGYRVTAQQQLEVLQSWKKDGRKQTGQTKDLLKAAALG
VYEQYLSEKASPRVQVDRACVDRLAEKLNKEDPTPEIFDDIQRKVYDMMLKDERFYPSFK
QHPLYVRMLAELDMLKEPSYRGSDDGDAESFNGSPTGSINLSLDDLTNATTDESAQLHAF
ISDTGVCNDHGKTYALYAITVFRKNPDGSEDTWKTYRRYSDFHDFHMRITEQFENLGSIL
KLPGKKTFNNMDRDFLERRKKDLNAYLQLLLNPELVKACPMLIGHVHDFLENKAYSKGKG
DFARKMDTFVNPLRSSMRNVSNAVKSLPDSLAEGMTKVTDNVGRMGERLGQDLRQSIFKV
PPLIPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQ
LIRATYGDTINRKIVDHVDFMTSPEQVADYVKRFRDSYWPNGILAETPPCRDKSIRMRTR
VAAKTNLLGIMPDELKHIIGAETTRKGILRVFEMFQHQQLNRRLVYVFLEGFLETMFPQY
KFPELFVKLHSRSPRIRTYSQKVRTLQKR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggggaacctggttactgtgacctcctacagagcctcagacggaacctgcgattatgta
tatctccacccgtgtctacagtgtgacccacttggaactttattcaatctgagacaggcc
agtctgtcagtctggggatgggggggcctgggaatcctgcttttcctcatcacgttcgga
ccctttgccatattttatttggcgttttatatcttctgttttcttggcgggggcttcgct
gtcacgcttttatttggaaagacaaattccgaaaaacacctagagaaatgtgagcactcc
tacctgcctcccaccccaacaggcatagccaagactttagaggagctgaagcaggagacg
aagcccatcaaaatcgaccggcgtctgacgggatccaacttcatcgatgagcctctgcaa
caggtgattcagtttgctctgagggactacatccagtactggtattacacgctgagcgag
gacgagtccttcctgctggagatcagacagacggtgcagaacgctctggtgcagttctcc
acgcggtccaaagaggtggactggcagccttatttcaccaccagactggtggacgacttc
gccactcatctccgtgttttcagaaaggcccaggagaggctgaacgagagggaggacccc
aaacaacgtgaagctccagaggagctgctggatgcgttttttgagacggaggtggagatg
gagaggaagatctgcagagatgtagtgtgcacctcccatggagatgaagaagggttcctg
cgggatctgtgtgaggtgctgctgtatctcttactacctcctggagatttccacaacaag
aacatgagatacttcctcagggaaatcttggcgagaggagttctgctgccgttgattaac
caattaagtgatcccgattatatcaatcagttcatcatctggatgatccgagactccagc
tgcaactacgaagccttcatgaacatcctgaagctgacggacaagacggccgaactggag
gctgtcaaagacaaagtactggaggagctccagtacctgcgttcgctagataccgcagga
gatgatatcaacactataaagaatcaaattaacagtttactgtttgtgaagaaagtctgc
gaaacaagaatacagaggctgcagtcgggaaaggacgtcgacgctatgaaacttgcggcg
aattttgggaagttgtgcatcatcccgctggatcatatcctcgtgcacaacatagcgctc
cagttttttatggactacatgcagcagatggggggtcaggcggatctgttcttctggctg
acggtggagggataccgggtcacagctcagcagcagctcgaggttttgcagagctggaag
aaggacggcaggaagcagaccggccagactaaggacctgttaaaagccgctgcgctcggt
gtctacgagcagtacctctcggagaaggcgtctcccagagtgcaggtggatcgggcctgt
gtggacagactggctgagaaactcaacaaagaggatccgactccggagatttttgatgac
atccagagaaaggtgtatgatatgatgttgaaggacgaacggttctacccttcgtttaag
cagcaccctctgtacgtgcgcatgctggccgagttggatatgctgaaggagccgagctac
cggggatcagacgacggagacgcagagtcttttaacggatctccaaccggaagcattaat
ttgtctttggatgacctcacgaacgccaccacagacgagtcggcgcagctacatgctttt
atttctgatacgggcgtgtgtaatgaccacgggaagacctacgcactctacgccatcact
gtcttccgtaagaacccagacggcagtgaggacacctggaagacctaccgccgctacagc
gacttccacgacttccacatgcgcatcacggagcagtttgagaatctcggctcgatatta
aaacttcctgggaagaaaacgttcaacaacatggacagggactttcttgagagaaggaaa
aaggacctgaacgcttatctgcagctgcttctgaatccagagctggtgaaggcctgcccc
atgctgataggtcacgtccatgacttcttggaaaacaaggcatacagcaaaggcaagggc
gactttgcacgaaagatggacacatttgtgaaccctctgcgtagctccatgagaaacgta
tccaatgctgtgaagtcacttcctgacagcctcgctgaaggaatgaccaaagtgacggac
aacgtggggcgcatgggcgagagactgggccaggacctcagacagtccatattcaaggtg
ccgcccttaattccgaagtcggacatcgaccctgagcactgccgagtgtctgcacagctg
gatgacaatgtcgacgataatatcccactgcgtgtgatgctgctgctgatggacgaggtg
tttgacctgaaggagaggaatcagtggctccgcaggaacatcaagaaccttctacagcag
ctcattagagccacatacggagacaccatcaacaggaaaatcgtggatcatgtagacttc
atgacgtctccagaacaagtagccgactacgtcaagaggtttagagattcctactggccg
aacggaatcctagcagagacgccaccgtgccgagacaagagcatccgcatgagaaccaga
gtagcagcaaagactaacctcctgggcatcatgccagacgaactcaagcacatcataggg
gcggaaaccacgcgcaagggcatcctccgggtctttgaaatgttccagcaccagcagctg
aaccgccgcctggtctatgtcttcctggaggggtttctcgaaaccatgttccctcagtac
aagttccccgagctgttcgtcaagctgcactcacgctcgccacgcatccgcacttattcg
cagaaagtccgcaccttacagaagaggtga
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