Ictalurus furcatus (blue catfish): 128600646
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Entry
128600646 CDS
T09387
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
128600646 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128600646 (hdac5)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128600646 (hdac5)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128600646 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
128600646
NCBI-ProteinID:
XP_053469242
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All DBs
Position
24:1900908..2000682
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AA seq
1116 aa
AA seq
DB search
MLLKPTVPGLCAMLQTIYETESCFSSDSTAGTNMPSTVVEVKSSLPSGMQSPVAGGVSEQ
SGGGGGGNAGGPVDLRTDPRLSALSVMDPALREQQLQHELLLLKQQQELQKQLLFAEFQK
QHEVLTRQHEVQLQEHLKQQQELLAAKRQQELEQKRKLEQQRHEEMEKQRLEQQLIMLRN
KEKGKESAIASTEVKLKLQEFLLSKKEPSSGGLNHSFPQKCWGAHHTSIDQSSPPQSNTP
GTPPSYKLPPLLGSYEGKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVIS
TFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPNIHAEQLRSLHQSLNAD
GAVSPLSLYTSPSLPNISLGLPANAHITAPQKLGVQPEAERQVQGVRQGGVLGKFGSGSS
VSVCLDSEPPSAPNSHSSHNSLLQHVLLLEQARQQSALLAVPMYGQSPLVTGERVSSSMR
TVSKLPRHRPLARTQSAPLPQTPQALQHLVIQQQHQHFLEKQKHYQLNKILSKGAELPRP
PPTHPEETEEELTETAEMTEEWGEGPERVREGLSKESSGETTPPSERAVPLKGESTESDL
EEEEDEDEAIELKECDEEGDPYRQFSEQQHLQQLNVFQASLSITGMPHRPLGRAQSSPIT
SSLKATPMGELPIKHLFTTGLVYDTLMLKHQCMCGNTHIHPEHAGRIQSVWSRLQETGLL
GRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGI
GVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAGELKNGFAVVRPPGHHAEESTAMGFCF
FNSVAVTAKLLQQKLGVAKILIVDWDIHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGS
GAPEEVGVGPGVGFNVNIAWTGGVDPPMGDVEYLTAFRTVVMPIANEFSPDVVLVSAGFD
AVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGRVVLVLEGGHDLTAICDASESCVAALLG
DELDPLPQSVLQQKPCPKASASLERIIEIQSKHWSSVQRLAPTVSQSLQDAQRREKDEAD
TVTAMASLTVDTEHTASSSQSSSRAAEEPMEEEPVL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgaagccgaccgtgccggggctgtgcgccatgttgcagactatctacgagact
gaatcgtgtttctcttcggacagcacggccggcaccaacatgcccagcacggtggtggag
gtgaagagctcgctgccctcgggtatgcagagtcccgtggccggaggtgtcagtgaacag
agcggtggaggaggaggaggaaacgctggaggtccggtggacttgcgtacggatcctcgc
ctgagtgctctgagcgtgatggacccggcactgagggaacagcagctccaacacgaactt
ctcctcctcaagcagcagcaggagcttcagaagcagcttctgttcgccgagttccagaaa
caacacgaggtgctcacacggcagcacgaggtccagctgcaggagcacctcaagcagcag
caggagttgttggcagcgaagcgtcagcaggagttggagcagaagaggaagctggagcag
cagaggcacgaggaaatggagaaacagaggctggagcagcagctcatcatgctgaggaac
aaggagaagggcaaagagagtgccatcgccagcaccgaggtcaaactgaagctccaggag
ttcctgctgagcaaaaaggaaccctcctctggcgggctcaaccattccttccctcagaag
tgctggggtgctcaccacacatccatagaccagagctcccctccgcagagcaacaccccc
ggcacacccccttcttacaaactgcctccccttctgggatcctacgagggcaaagacgac
ttcccgcttcgcaagacagcatcggagcccaatctgaaggttcgttcgcggttaaaacag
aaggttgctgagaggaggagcagtcctttactccgccgtaaagacggcaccgtcatcagt
accttcaagaagagagccatcgagatctcggtctcctccatgtgcagcagcgcccccggc
tcaggccccagctcccccaacagctccaacagcgccatcgccgagaacggttccagcggc
tccgtcccgaatatccacgccgagcagttgcgttccctgcaccagtctctgaacgcagac
ggagcggtgagcccgctgagtctgtacacgtctccgtctctacccaacatctctctgggt
ctgccggctaacgcacacatcaccgctcctcagaagctcggggttcagccggaggcggag
cggcaggtgcagggggtgcgtcagggcggcgtgttggggaagttcggcagcggctcgtcc
gtgtccgtgtgtctggactcggagcctccgtcggcccccaacagccacagcagccacaac
tccctactgcagcacgtcctcctgctggagcaggcccggcaacagagcgcgctgctcgca
gtgcccatgtacggccagtcgccgttggttacgggtgaacgggtgtcgagcagcatgcgg
acggtcagtaaactgccgcggcaccgtcctctggcccgcacgcagtcggctccgttaccg
cagaccccccaggcgctgcagcacctcgtcatccagcagcagcaccaacacttcctggag
aaacagaaacactaccagctcaacaagatcctctccaaaggggcggagcttccaagacca
cccccgacccaccccgaagagacggaggaggagcttaccgagacggcggagatgacggag
gagtggggggaggggcctgagcgtgtgagggaggggctaagcaaagaaagctcgggcgag
acgacgcccccttccgagcgggcggtcccgctgaaaggcgagagcacggagagcgacctt
gaggaagaggaggacgaagatgaagccatcgagctgaaggagtgtgatgaagagggcgac
ccctacaggcagttctcggagcagcagcacctgcagcagctgaacgtgttccaggcgtct
ctgtccatcacgggaatgccgcacaggcctctgggaagagcgcagtcgtcccccatcacc
tccagtcttaaagccacgcccatgggagaattacccatcaagcacctcttcactacaggt
ctggtgtacgacacgctcatgctgaagcaccagtgcatgtgcgggaacacacacatccac
ccggagcacgccggacgcatccagagcgtgtggtccaggctgcaggagacgggactgctg
ggccgatgtgagaggatccggggcaggaaggcgaccctggatgagatccagacggtgcac
tcggagtatcacacactgctgtacggcaccagccccctcaaccgccagaaactcgacagc
aagaagctcttaggtcccatcagtcagaaaatgtacgccgtgctgccgtgtggagggatt
ggggtggacagtgatacggtgtggaatgagatgcactcttccggagccgtgcgcatggcc
gtgggctgcgtcatcgagctcgcctttaaagtagcggctggagaactgaagaacgggttc
gctgtcgtccgtcccccgggtcaccacgcggaggagtccacggccatgggtttctgcttt
ttcaactcggtggctgttaccgccaaactgctgcagcagaaactgggcgtggccaaaatc
ctcatcgtagactgggacattcaccatggtaacgggacccagcaggctttttacaacgac
cccaacgtgttgtacatctccctgcatcgctatgacgacgggaacttctttcctggaagc
ggggctcctgaagaggtgggagtgggtcctggtgtgggttttaatgtgaacatagcgtgg
acgggtggagttgatcctcctatgggtgatgtggagtatctcacagctttcaggacagtt
gtgatgcccatcgctaacgagttctcccctgacgtggtgctggtgtcggctggcttcgac
gccgttgagggacaccaatctccactcggaggctacaacgtcaccgccaaatgttttggt
cacctgacaaagcagttgatgaagttggcaggggggcgcgtggtcctggtgctagagggg
ggtcacgacctcaccgccatctgcgacgcctctgagtcctgcgtggccgcgctgctcgga
gacgagctggacccactgcctcagtctgtgcttcagcagaaaccgtgtccgaaagcatca
gcgtccctcgagagaatcatcgagatccagagtaaacactggtcctcagtacagagatta
gcgcccacggtgtctcagtctctgcaggacgctcagcggcgggagaaggacgaagcggac
acggtgacggccatggcgtctctcaccgtggacacggagcacacggcgtcctcctcacag
agcagcagcagggctgccgaggagccgatggaggaggagcccgtgctgtag
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integrated database retrieval system
