Ictalurus furcatus (blue catfish): 128600884
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Entry
128600884 CDS
T09387
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128600884 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128600884 (tprb)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128600884 (tprb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
TPR
Nucleoprot-TPR
Motif
Other DBs
NCBI-GeneID:
128600884
NCBI-ProteinID:
XP_053469607
LinkDB
All DBs
Position
25:complement(232936..250668)
Genome browser
AA seq
2345 aa
AA seq
DB search
MAAALQQLLERTELCKLSKAVQGKLEKHLAEQQSETDYYKAQYEQLRADSEQQYSDLDKR
YTESQDQCLSLTKDYQKLQEDFTSLDEELKSLREKTKERESLYTELESEQKELSKLKNEL
EAEKRDLVRTLERTSQEVEGQSEDLKRLGDRLADVSATNMQLQLKVDQLEALEVSIKYKE
KRLEQEKDLLQDQVTWLSEELKTKSEELLSLSRQKGSEILELKCSLNNKEDECTRVQDQL
TSLKSSNDNLQKQAEDLISKLKEAKEQQAGSEEKFRNELNANIKLSNLYRGAAADAEAKS
EELSQAVEELHKLLKEAGEAHKAMEVQLAEAESRKQKDVAELMERISILEKELDNANDLL
LDTARRAGTTSAPVLPDKQLSTMSPTAAAVAKIRPGMKLTEIYTAYVESQEQLQLEKVEN
KRVNKYLDDIVQEVEAKAPILKRQREELERAQISVASLSAKLEHAVQEVQRLQKEADEAN
KHASKLERDNQRFEVQLRDMAHQVRVLLIELEEARGNHVIRDEEDVSSADVSSTSEVISQ
HLVTFRGVAELQQQNQRLLVALRELGDAQERGEMEAESTKLTELQISLEKARIELEQLRE
QRARQMQQVESIVRQRDMCRVLLAQATGVSFPQQGASLEEFSLTSTPRRSPAATPNAATP
TGLVAAAVESTETVEARAALKQLQEVFGAYKKEKAESEKALTEQCEKLQEQVSELRSQNA
TVSTQLEFASKRYEMLQDNVEGYRKEIASLREKAQKQAASGQKSEQTLHALTQDLRAANE
KLSMVEARAEALRKERDLLKMVESSLSQEKESILSQQRSQNLLLTNLKSMQATLERSESE
TRQRLTAQVEKQEREISQLQKKLEHEVEQRHTLGRNHDKQLLDAKKQLEVQCALHQRTRE
QLNTAQQELNSLQQQLNTREGRVSSPSTLTGLAGPQSGVEDVEELRTRLNEAQSRSEDLA
ARLESSTASLEQYRAMCLSLEEALEKEKQVTEQVRTSVESQLLEAHEQLQQQEKKLLEAE
KEKNEMQEEKQKAVAATEQQVSELQRNLSSLQAEHQEALQKAATAVAQVQQSMLDSQEQA
RLAAEAQDKYEQEMLLHAADVEALQAVKAQAQHASELRQQLEDKLQTVSAQLLEARVSWE
EQEKILREDQTKMEARCRDLQRQNELLHEQIQAMSEKMATQLQQAAGDSSLNVSLTEEGK
SQEQLLEILRFIRREKEIAESRFETAQGESLRHRLRVEHLERELKEVQDCLSAERERMQV
TAKTLSQHDELMKKTETMSVLVETNKMLRDEKERLEQELQQAQAKVSKLQTDALPMQESN
AELSEKSGMLQAEKKLLEEEIKRWKARTQFLVTQQKDTDPEEYKRLHSERDAHVKRIQQL
SEETSRLKAEATRSSVSCSTLQSQVQNLRDNLGKVVADRDSVKKELQAKTLDVQEKLKTI
TQVKKLGRRYKTQYEELKVEHDKMVAAAASAPVQDQEAQQASAQELQSLRDSLSQSESKI
RELESQLETLNKTIGERETETRTAQDQASHLQGELARMRQELAEKSAQEDRLRQQLVEKE
DRTRKAFVGAKQKINHLVDVKGQLAKENEELKQQREELEVRVNALRSQYEGRLSRQEKEL
RELRDLREQQERHVEQRDEPVEQGPSKTQEQQRTTEQRQISLKSTPVAERGSASSSEPPT
ANIKPTPLVATPSKPQAVTANKPTPRASIKPMVTPPVQPTVTPTATVMPTTQQENQEALS
SEAPMEHVPVFGSTTGSVRSTSPNVQTTLAQPVLGVQQSQTTAFVQPTQQQSVPPAEPAS
QEPTSANVMMEATPSTSQMERPSTSTAVFGTVSATPGSTSTKRPREEEFENITVELEPQE
EPTEPPISKKLRMQRVEIEMLTEDSAEAESVVPGGSQEAVDAVEELENYPSLEEVDEESG
ASQSVPVEFLLSQESEEPVIVIVSDSDSEEEQEEETDEEEQDYEEEEEEDDDEDDDEGGI
EGEGEDSNEGSGNGDPSEAYEGDNTEGPDATDPGTETEESLGVTDSAPCTAGPATLSGSL
EVFSPEPITSSVPRPPPSPRRLQQSLPPRLSILAPPIQELAPPSQVQRIPARRQPVGRGL
QLTSGSSGCTPQQHFYEEDDRTVPNAPTLAASHRTDCFSEALHSPQVAGVLRFGFILSDD
VPQTSSSNADLDQLASQGGLGMYDIPLFLPTHEDSPGGRSVPTTPLPLAAPVSAFSETHP
SELPEHASQSVPTVSTSTPSVCVVTGPGAAEERDVLLEAGEDGSSTEVALESSQTEAEEP
AQPSDEASLPSTSQEPSSSSADTSSTRPASVRTGSGRQWTRGRATRGFVKRDGSGVMGMR
RRFAR
NT seq
7038 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgctgcaacagctcttagagcgcaccgagctgtgtaaactgtcgaaggcg
gttcaggggaaactggagaaacacctggcggagcagcagagtgagacagattactataag
gcgcagtatgagcagcttcgggcagacagcgagcaacagtattctgacctggacaaacgg
tacacggagagccaggatcagtgtctgtctttaactaaagattatcagaaactgcaggaa
gacttcacatcactcgatgaagagctgaaatctctgcgtgaaaaaaccaaggagcgtgaa
tccttgtacaccgagctggagtccgagcagaaggagctctccaagttaaagaatgagctg
gaggctgagaagcgagacctggtgcgcacgctggaacggacgtcgcaggaggtcgagggc
cagagcgaggatttgaaacggctcggggacaggctggcagacgtcagcgctacaaacatg
cagctgcagttgaaggtagaccagctggaggcgttggaagtctcaatcaagtacaaagag
aaacggctggagcaggagaaggatcttctccaggaccaggtgacctggctgagcgaggaa
ctgaagactaaaagtgaggagcttctctctctgtcgcggcagaaaggcagcgagattcta
gagctcaagtgcagcctgaacaacaaagaagatgagtgtacccgagtacaggaccaactg
accagtctgaaatcctccaacgataaccttcagaagcaagccgaggacttgatcagcaaa
ctgaaagaggccaaagaacagcaagccggctcagaagagaagttccgcaacgagcttaac
gctaacatcaagctgtccaacttgtaccggggcgcagcggcggatgcggaggcgaagagc
gaagagctgagccaggccgtagaagagctgcacaagctgctgaaggaggcgggagaggct
cacaaagctatggaggtgcagctggccgaggcagagagccgcaaacagaaggatgtggca
gagctgatggagcgcattagcatcctggagaaagagctggacaacgccaacgatcttctg
ttggacaccgcacgccgagctggcaccacgtctgcaccggttctcccagacaaacagctc
agcacgatgtctcccaccgcggcggccgtcgccaagatcaggccgggcatgaagctcacc
gagatctacacggcgtacgtagagtcccaggagcagctgcagctggagaaggtggagaac
aaacgtgtgaacaagtacctggatgacattgtgcaggaggtggaggctaaagcacccata
ctaaagaggcagagggaggagctggagcgtgcgcagatatccgtggccagtctgtctgcc
aagctggagcacgctgtgcaggaggtacagcgcctgcagaaggaggccgacgaagccaac
aagcacgcctccaagctggagagagacaatcagaggtttgaggtgcaactgcgtgacatg
gctcaccaggttcgggtgttactgatcgagctggaggaggcacgtgggaaccacgtgatc
cgtgacgaggaagacgtgagctcggcggatgtgagcagtacgtctgaggtaatctcgcag
cacctggtcacgttccgcggtgtggcggagctacagcagcagaaccagcgcctcctggtg
gccctgcgcgagctcggagacgcgcaggagagaggcgagatggaggctgagagcaccaaa
ctgacagagctacagattagtttggagaaggcccggatcgagctggagcagctccgagag
cagcgtgcacgccagatgcagcaggttgaatccatcgtgcgccagcgagacatgtgccgt
gtcctgctcgcccaggctaccggggtcagcttccctcagcaaggtgcttcgttagaggag
ttctccctcacctccaccccccgtcgctcccctgcagccacgcccaatgcagccacgccc
accggcctcgtcgccgcagcagtcgagtccacggagacggtggaggccagagctgccctg
aaacagctccaagaggtgttcggagcctataagaaagagaaggctgaaagcgagaaggct
ctgaccgagcagtgtgagaagctgcaggagcaggtgtctgagctgagatcccagaacgcc
acagtttccactcagctggaatttgcctctaaacgatatgaaatgctgcaggataatgtg
gaaggttaccgtaaggagattgcctctctaagggagaaggctcagaagcaggctgcctct
gggcagaaaagcgagcagaccctccacgctctcacacaagacttacgggcagctaatgag
aaactgtccatggtcgaagcgagagcagaggccctgcgcaaggagagagacctgctgaag
atggtggagtccagtctgagccaggagaaggagtcgatcctctctcagcagaggagccag
aacctcctgctcaccaatctgaaatccatgcaggccacgttagagcgttcggagtcagaa
actcggcagcggctcacggcgcaggtggagaagcaggaacgagagatttcccagctgcag
aagaagctggagcatgaggtggagcagagacacacgctagggcgcaatcacgacaagcag
cttttggatgctaagaagcagctggaggtgcagtgtgccttgcaccagaggaccagagag
cagctgaacactgcacagcaggagctcaacagtctccagcagcagctgaacaccagagag
ggaagggtttcctcacccagcactctcacaggcctcgcggggccgcagagtggcgtagag
gatgtagaggaactgcggacgcgtttgaacgaggctcagagcagaagcgaggatctggct
gcgagactggaaagcagcactgcctctctggagcagtacagagccatgtgcctcagcctg
gaggaggccctggagaaagagaaacaggtaaccgaacaagtgaggacatcggttgaaagc
cagcttttggaggctcatgagcagcttcagcaacaggaaaagaagcttctagaagctgag
aaggagaaaaatgaaatgcaggaagagaaacagaaagccgtggcagccactgagcagcag
gtgagcgagctgcagaggaacctgagcagcctgcaggccgagcaccaggaagcgttgcag
aaggcagctacggcggtcgctcaagtgcagcagtccatgctggatagccaagagcaggca
cgtctcgccgccgaggcccaggacaagtacgagcaggagatgctgttgcacgcggccgac
gtggaggccctgcaggcagtcaaagcccaggcccaacatgcctcagagctccgccagcag
cttgaagacaagctccaaacggtcagcgcacagctgctcgaggcccgagtatcctgggag
gagcaggagaagatcctcagagaggaccagactaagatggaggcacgttgtcgagacttg
cagaggcagaacgagctcctacatgagcagattcaggcaatgagcgaaaagatggcgacc
cagctgcagcaggcggccggcgatagctcgctgaacgtttctctcacggaggaggggaag
tctcaggagcagctcctcgagatcctcaggttcattcgtcgggagaaggagatcgctgag
tcgcgtttcgagacggctcagggagagagcctgaggcacaggctgcgagtggagcacctg
gagcgggagctgaaggaggtccaggactgcctcagtgctgagagagagaggatgcaggtg
accgcgaagaccttgtctcaacacgatgaactgatgaagaagactgagaccatgagcgtg
ctggtggagaccaataagatgctgcgagacgagaaggaaagactggagcaggagctgcag
caggctcaagccaaggtgagcaagctacagacggatgccttgcccatgcaggagtccaac
gccgagctgagcgagaagagcggcatgctgcaggctgagaaaaaacttctggaagaggaa
atcaagcgctggaaagcacgcactcagttcctggtgacccagcagaaggacacggaccca
gaagaatataagcggctgcactctgagagagacgctcacgttaaacgcatccagcagctc
agtgaggagaccagtcggcttaaggcagaggcaaccaggagtagcgtttcctgcagcacg
ctgcagtctcaggtgcagaacctgcgggacaacctcggcaaggtggtagcagacagggac
agcgtgaagaaagagctacaggccaagaccctggatgttcaggagaaactcaagaccatc
acgcaggtcaagaagcttgggcgccgctacaaaacgcagtatgaggagctaaaagttgaa
catgacaagatggtggcggctgctgcttctgctccagtccaagaccaggaggctcaacaa
gcctcagctcaggagctacagagcctccgagattccctcagccaatcagagtccaagatt
cgggagctggagagccaactagaaaccttaaacaaaacgataggggagcgtgaaacagaa
acacgcaccgcacaggaccaggcgtcccacctgcagggcgagctagcacgcatgcgccaa
gagctggcggaaaagtcggcccaggaagaccggctccggcagcagctggtcgagaaggag
gaccggaccaggaaggcgttcgtcggggccaagcagaaaatcaaccaccttgtggacgta
aagggtcagttggcaaaggagaacgaggagctgaagcagcagcgtgaggagctggaggtg
cgcgtcaacgcgctacgctcgcagtacgagggccgcctgagccggcaggagaaggagctg
cgggagctacgagacctgcgcgagcagcaggagagacacgtagagcagagagatgagcca
gtggagcaaggccccagcaagactcaggagcaacagaggactacagaacagaggcagatt
tctctaaaatccacaccagtggctgaaaggggcagtgcaagctcgtctgagccccccaca
gctaacataaagcccactcccctggtggcgactcccagcaagccccaagccgttacagcg
aacaagcccacgccgagggccagtataaaaccgatggtcacccctcctgtacagcccaca
gtcactcctactgccacagtgatgcccaccacccagcaggagaaccaggaagcgctgtca
tcagaggctcctatggagcacgtgcctgtgtttggaagtaccaccgggtccgtgcgctcc
accagcccgaacgttcagaccactctggctcagcccgtgctcggtgtccagcagagccag
accactgcgttcgtccagcccacacagcagcagagcgtaccccccgccgaacctgcgagt
caggagcccacctctgccaacgtgatgatggaggctacacccagcacgtcccagatggag
aggccctccacgtccacggctgtgttcggaacagtctcggccacacctggcagtacctcg
accaagcgtcctcgagaggaggagttcgagaacattacagtggagctggagcctcaggag
gagcccactgagcctcccatctccaagaagctccgcatgcagagagtggagatcgagatg
ctcactgaggacagcgctgaagctgagagtgttgtaccaggtgggagtcaggaagctgtt
gatgctgttgaggagctggaaaactatcccagcctggaagaggtagatgaggagtctggg
gcatctcagtccgtacctgtggaatttctcctctcccaggagtctgaggaaccggtcatc
gtcatcgtcagtgactctgatagtgaggaagagcaggaggaggagaccgatgaagaggag
caggattatgaggaagaggaggaggaggacgacgacgaggatgatgacgagggaggaatc
gagggggaaggagaggacagtaatgaggggagtggcaatggcgatccctccgaggcctat
gagggtgacaatacggagggtcctgatgccacagatccaggtactgaaacagaggaaagt
ctcggcgtgacagactccgccccgtgcacggctggtcctgccaccttatccggctcgtta
gaggtgttctcccctgaaccaatcaccagctccgtaccccgtcctccaccgtccccacgg
agactgcagcaatcactccctcctcgactcagcattctggctccacctatacaggagcta
gctccgccctctcaagtccagcgcatcccagcgcgacggcagccggtcggacgaggactg
cagctgacttcggggtcgtccgggtgcaccccacagcagcacttctatgaggaggacgac
cgcacggtccccaacgcccccacgctggctgcctcccatcgtactgactgtttcagtgaa
gctctccattctccccaggtagcaggcgtcttgcgtttcggcttcatcctctcggacgac
gtcccacagaccagctcttccaacgcagatctggaccagctggcctcgcaaggagggctc
ggcatgtacgacattcccctgttcctgcccactcatgaagactcgccagggggacgtagc
gtacccaccacccctctcccgttggctgctccggtgtctgcgttctcggagacacacccc
tcagagctgcccgaacacgcctcccagtctgtaccaacagtaagcacgtccacaccgagc
gtgtgcgtcgtgaccgggcccggcgcagctgaagagcgagacgtcctgctcgaggcaggg
gaagatggaagcagtacagaggtagcgctggagtcttctcagactgaggctgaagagcca
gctcagccttcagatgaggccagtctcccctctaccagccaggagccctcatccagctcc
gcagacacaagcagcactcggccagccagcgtcaggacgggatcgggcaggcagtggact
cgaggacgggccaccagagggtttgttaagagagatggatcaggagttatgggaatgcga
aggcgctttgcaagatga
DBGET
integrated database retrieval system
