Ictalurus furcatus (blue catfish): 128600975
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Entry
128600975 CDS
T09387
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128600975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128600975
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128600975
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
128600975
NCBI-ProteinID:
XP_053469775
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Position
25:complement(926759..970017)
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AA seq
472 aa
AA seq
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MSTGETEKTTGNASVDDEDWLYGDNDDDVNDAAGDDDDKKTETEIFSALVGDVEGVNGVD
HQDADSDSDSDDNLRVTIGNIKTDIQSTSTAVNLKTSGITTVSGTKVRGVALVAVDGIIG
TPELEVDEEKPWRKPGADLSDYFNYGFNEDTWKTYCDKQRRLRMSLEFMTLGSSDKTTGS
HDEPVSKSDCSSRKLKNSIDVIGGQTETIIRVEGRRHHSTDGSSMQVPSSSERPVDAEPP
SSKPPPFFAPIIPSPPFPLLSISSTPPFIQHPPRPPMSVPPPGFPLPPEVPSLPFTSGSG
RSGGSYDGRCAPLYPFAAGVYPHALGPMTPWLGLSDRAKVWKPYSCQDKERERGKDRERT
RDREPKKEHERERDQENTPAFRSRSSDKERASRHREHGDRERERHREHDRDGREREERHR
DRKHRERTERRKSSRSSSSRRRHSSDDGESHRRHRYKRSKRNKDSTDTESTD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggggaaacggaaaaaacgacaggcaacgctagtgtggatgacgaggattgg
ctttacggagacaacgacgatgatgtgaacgatgccgcaggtgatgatgacgataagaag
accgagactgaaattttcagtgctttggttggagatgtggaaggcgttaatggagttgat
catcaggatgcggacagcgactcggacagcgacgacaacttgcgcgttaccatcggcaac
atcaaaacagacatccagagcactagcactgctgtcaatctcaagacctcaggcataacc
accgtgtcaggcacaaaggtcagaggagtggctctggttgcagtggacggcatcattggc
actccagaactagaggtggatgaggagaagccttggagaaagccaggtgcggacctgtca
gactattttaactacggcttcaacgaggacacctggaagacttattgtgacaaacagaga
agactgcgcatgagcctagagttcatgaccttaggctcgtctgacaaaaccacgggtagt
catgatgagccggtgtctaaatcggattgctcctccaggaagttgaaaaactccatcgat
gtaatcggagggcaaacagagaccatcattcgtgtggaagggcgaagacatcacagcaca
gatggaagcagcatgcaggtgccgtcctcctccgaaaggcccgtggatgctgagccgcca
tcctctaagccacctcctttctttgcccccatcattccttctccaccttttcctcttctc
tccatcagctccactcctccttttatacaacacccaccacgaccgcccatgagtgtcccg
ccacctggttttccacttcctcctgaagttccttctcttccctttacatcaggcagtggc
cgttcaggaggaagctacgatggccgctgtgccccgttgtacccctttgctgcaggtgtt
tatccacatgctctggggcccatgacgccctggctgggcttgagtgaccgtgccaaagtg
tggaagccttacagctgtcaggacaaagagagggaacgcgggaaggatagagagaggacc
cgggaccgagagccgaagaaagagcacgagagagagcgcgatcaggagaacacgccggcg
tttcggagccgcagcagtgacaaagagcgtgcgtcacgtcacagggagcacggcgatcgg
gagcgagagagacatcgggaacacgatcgagacgggagagaaagagaagagcggcatcgt
gacaggaaacacagggagcgtaccgagcgacgcaaatcctcacgcagcagtagcagtcgg
agaaggcattccagcgatgatggagagagccacaggagacaccgatacaagcgctccaaa
cgcaacaaggacagcacggacactgagtccactgactga
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