Ictalurus furcatus (blue catfish): 128601017
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Entry
128601017 CDS
T09387
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128601017 (brf1b)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
128601017 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
Kinase-PolyVal
Motif
Other DBs
NCBI-GeneID:
128601017
NCBI-ProteinID:
XP_053469848
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Position
25:complement(7695603..7764568)
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AA seq
693 aa
AA seq
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MSARQCKSCGGADIDIDQARGSAVCTACGSVLEDNIIVSEVQFVENSGGGASAIGQFVSA
DGPVKAPVLGTGFHTSLGKESRAQTLQNGKRQIHSLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
VDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKEVIGVVKVCEATLRKRLTEFEDTPTSHLTIDEFMRVDLEEECDPPSFIAGQKK
LKIQQLEQELARKLDEYQGEISSYQDEIETELENSRPKLRGIYAMYAREDTNDGSLSLVS
DLAGNEDIEDEEMEAAAQHLNEDFIKQVLPELEQGPKKGTEAQTQGKGAAELPSGSTHVP
LTSLLGPLPSAASLGLTDSIRHCMTEEGEVEDKSDNGELDLEGIEEDEIEKYILNEKEVQ
AKTELWMKQNEEYLREQKEKEERIAKEKEQGIYKEKPKKTSKRREPIRASTAGEAIEKML
EQKKISSKINYDVLRDLNSKGSSSPAHKTEEVSGIVPGRKKLTRRKKQPNKSNLGLAKPA
SLMGKRLRPLISSNPKKKRAATQIVPNAVMLPPVTPETPPAPTSPLVIESGPVTYEEPTE
EEEDEEVEEPCVSAMKLMGGNEYGCEAEEEEVF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaggcagtgtaagagctgtggtggagcggatatagatatcgaccaggcgcgt
ggaagtgctgtgtgcaccgcctgtggatctgtgctcgaggataacatcatcgtgtctgag
gtgcagttcgtagagaacagcggaggaggagcatctgctatcggacagtttgtgtccgct
gatggtcctgtgaaggccccagtgcttggaaccggcttccacacaagtcttgggaaggag
tcacgagctcagacacttcagaatgggaaacggcaaatacacagcctgggcagccagctg
cagctgaaccagcactgccttgacacagccttcaacttcttcaagatggtggtgagcaag
catctgacaagagggcgcaagatggcccatgtcatagctgcctgcctctatctggtgtgc
cggacagagggcactcctcacatgctcctggacctgagcgatctcttacaggtgaatgtg
tatatcctgggaaagacttttctgctgttggccagggaactctgcatcaatgcacctgct
gtcgatccatgtctgtatattccacgctttgcacacatgttggagtttggagagaaaacc
catgaagtgtccatgactgcactgagactgctgcagaggatgaagagagactggatgcac
acaggacgcagaccatctggactctgtggcgcagctctgctggtggcggcccgcatgcat
gaattccgccgcacggtgaaggaggtcattggcgtggtgaaagtatgcgaggcgactctc
agaaagaggctgacagaattcgaggacacgcccaccagtcatttgactattgatgagttc
atgcgagtggacctggaggaggagtgtgatcccccttctttcattgctggtcaaaagaag
ttaaagatccagcagctggaacaggagctggccaggaagctcgatgaatatcaaggtgag
atcagctcctatcaggatgagattgagacagaactggagaacagcaggcctaaactgaga
ggaatttatgccatgtatgcaagagaagacaccaatgatggcagtctgtctctggtgtcg
gacctcgcgggaaatgaggacatagaagatgaggagatggaggctgcagctcagcacctc
aatgaggacttcatcaagcaggtgttacctgaactggagcagggccctaagaagggcaca
gaggcacagacccagggtaaaggggcagcagagctgcctagtggctccacccatgtgcca
ctgacttcactgcttggccctcttcccagcgctgccagcctcggcctcacagactcgatc
cgccattgcatgactgaggaaggggaagtcgaggacaagtcagataacggcgagcttgac
ctggaaggcatagaagaggatgagatcgaaaagtacattctcaatgagaaggaggtgcag
gctaagacggagctgtggatgaagcaaaatgaggagtatctaagggagcagaaagaaaaa
gaagagaggatagctaaggagaaagagcaagggatctataaggagaagcccaaaaaaaca
tccaaaaggcgggagcccattcgggccagcaccgcaggagaggcaatagagaagatgttg
gaacagaagaagatttcgagcaaaatcaattacgatgtactgcgagatctgaacagcaaa
ggtagcagcagcccagcacataagactgaggaagtgtctggtattgtccctggacgtaag
aagctcacccgccgcaagaaacaacccaataagagcaatctgggtctggccaagcctgcg
agcctcatggggaaaaggctccgcccccttatatcgtcaaatcccaagaagaaaagagca
gcgacacagattgtacccaatgctgtgatgctgcctccagtgacccctgagactccccct
gcccctacttctcctctagtcatagagagtggcccggtgacgtatgaggagcccactgag
gaagaggaggacgaagaggtggaagagccctgtgtcagtgctatgaagcttatgggaggg
aacgaatatggctgtgaagccgaagaggaggaagttttttag
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