Ictalurus furcatus (blue catfish): 128601036
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Entry
128601036 CDS
T09387
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04137
Mitophagy - animal
ifu04140
Autophagy - animal
ifu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128601036 (hif1ab)
04137 Mitophagy - animal
128601036 (hif1ab)
04148 Efferocytosis
128601036 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128601036 (hif1ab)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128601036 (hif1ab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
128601036
NCBI-ProteinID:
XP_053469882
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All DBs
Position
25:8108028..8126007
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AA seq
776 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARCRRGKESEVFYELANHLPLPHNVTSHLDKASIMR
LTISYLRMRKLLNSDQSKDDTDKESVLESQLNSFYLKALDGFLMVLSEDGDMVYLSDNVC
KCMGLTQFDLTGHSIFDFTHPCDHEEVREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSR
GRTVNIKSATWKVLHCTGHVRVQEHSESSGVVGFKEPSITYLVLICEPIPHPSNIEVPLD
SKTFLSRHTLDMKFSYCDERITELMGHEPDELLNRSVYEYYHALDSDHLSKTHHNLFAKG
QVTTGQYRMLAKKAGYVWVETQATVIYNPKNSQPQCVVCVNYVLSGIVEEDMVLSLQQTV
PEKTVEKEEELQVEQEDKSVMDMMKLFKKDPLTCSVESPKSLYEKLKDKPEALTVLAPAA
GDTIISLDFDSPDSEIHVLKEVPLYNDVMLPSTSEKLPLPMSPLAPSDPSPDLVKMEPRG
EDFSFSSTSHHVPDTANTPSISANSSEPSSPADYFHVDSDIGSEFKLDLVEKMFATDTEA
ETHFNTDEMCDLDLEMLAPYIPMDDDFQLHIPSPLDPLSSGPQTGSDINSLFQQSPPRPS
STSSSTGSIKPEPSPHVPSPLHLLQEVSSIFVTSFDKASGAHENTPQTGKAAKRMQVEDR
DLSTKVLNVQRKRKLEITPLSQAVGLDVLLQSVDEAVEPGKRAKVLEVKGSSLLGGNKTI
LILPSDVASRLLSSSFESRGGLPQLTRYDCEVNAPIQDRQSLLQGEELLRALDQVN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcaccgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcggcccgatgtcgcaggggcaaggagtctgaggtgttctacgagctcgca
aaccatctgcccctgccccacaatgtcacctcccacctggacaaggcctccatcatgagg
ctcaccatcagctacctgcgcatgagaaaactgctgaactctgatcagtctaaggatgac
acagataaagagtctgtactggagagccagctcaacagcttttacctgaaggccctggac
ggcttcctaatggtgttatctgaggatggagacatggtctatctctctgataatgtctgc
aaatgcatgggcctcacacagtttgatttgaccggccacagcatttttgacttcacacat
ccctgtgatcacgaggaagtaagggagatgctggtgcacagaactgggtccaagaaaacc
aaggagcaaaacaccgagcgaagcttcttccttcgcatgaagtgcacactcactagtaga
ggacgcactgtcaacatcaagtctgccacatggaaagttcttcactgcacaggacatgtg
cgtgttcaggagcacagtgagagttcaggggtcgttggatttaaagagccctccattacc
tatctggttctgatctgtgagcccatccctcacccctccaacatcgaggtgcctctggat
agcaaaaccttcctaagccgccatactctggacatgaagttctcatactgcgatgagaga
atcacggagctgatgggacatgagccagatgaactgctaaataggtctgtgtatgaatac
taccatgccctggattctgaccacctcagcaagacacatcataatttgtttgcaaagggc
caggttaccacaggacagtatcgaatgctggccaagaaagcaggctatgtgtgggtcgaa
actcaagccacagtcatttacaaccccaagaactcccagccacagtgcgttgtgtgcgtg
aactacgttctcagtggtattgtggaggaggacatggttctttctctgcaacagactgta
cctgagaagactgtggagaaggaggaggagctgcaggtagagcaggaggacaagtcagtt
atggacatgatgaagctcttcaagaaggacccactgacgtgctctgtggagagccccaag
agcctgtacgagaagctaaaggataagccggaagccctcaccgttctggctccagctgca
ggggacaccattatttcccttgatttcgacagcccagactctgagattcatgtgctgaag
gaggtgcctctttacaatgatgtcatgctgccctccaccagtgagaaactccctttgccg
atgtcaccactggctcccagcgatccatctccagacttagttaaaatggagcctagagga
gaggacttttcattctcatccacatcgcaccatgtcccagacactgccaatactccttct
atctccgccaattcctcagagcccagcagtccagcagattacttccatgtggattcagat
attggctccgaatttaaactggatttggttgagaaaatgtttgctactgacacagaagcc
gagacccactttaacacagatgaaatgtgcgatcttgacctcgagatgctcgccccatat
attccaatggatgatgacttccagctgcatatcccctcccctctggacccactctcttct
ggtcctcagactggttctgacattaactcgctgttccagcagtcacctcctcgtccatct
tcaacatccagctccaccggctcgataaaaccagagccatcgccccatgtcccctctcct
ctccacctgctgcaggaggtgagcagcatcttcgtcacatccttcgacaaggcctcggga
gcccatgaaaataccccacagacgggcaaagcggccaagagaatgcaagtggaagaccgg
gatctttctacaaaggtgttgaatgtccagcggaagaggaagctggagattaccccactg
tctcaggctgtcgggctggatgttttgctccaatctgtggatgaagctgttgagcctgga
aagagggccaaggtgctggaggttaaaggttcaagcttgcttggcgggaacaaaaccatt
ctgatactaccgtctgatgtggccagtcgtttgctgtccagctcatttgagagcagagga
gggttaccacagctgacacgctacgactgcgaggtcaacgcccctattcaggaccgtcaa
tctctgctgcagggcgaggagctgcttcgtgctctggaccaagttaactga
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