Ictalurus furcatus (blue catfish): 128601038
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Entry
128601038 CDS
T09387
Symbol
yy1b
Name
(RefSeq) transcriptional repressor protein YY1b isoform X1
KO
K09201
transcription factor YY
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03082
ATP-dependent chromatin remodeling
ifu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128601038 (yy1b)
03083 Polycomb repressive complex
128601038 (yy1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128601038 (yy1b)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128601038 (yy1b)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128601038 (yy1b)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128601038 (yy1b)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128601038 (yy1b)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
128601038 (yy1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2H2_ASCIZ
TFIIIA_zf-C2H2
Raffinose_syn
zf-C2H2_ZN142
IBR
Motif
Other DBs
NCBI-GeneID:
128601038
NCBI-ProteinID:
XP_053469886
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All DBs
Position
25:complement(5967438..5980252)
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AA seq
389 aa
AA seq
DB search
MCVYMQAGKLAEFNMASGETLYIETDGSEMPAEIVELHEIEVETIPVETIETTVVGGDDD
DEHQPMIALQPLVTDDPNQVHHQEVILVQTREEVVGGDESDLRTDDGFEDQILIPVPAPG
SEEEYIGQTLVTVAGKSSMGRMKKGGSGGKKAGKKTYLSAGEATGRKWEQKQVQIKTLEG
EFSVTMWASDDKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLA
EFASNNSGSLGRTSVRMKPRKVKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVH
VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC
PFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtatatgcaagcaggcaagctggcggaattcaacatggcatccggggaaacg
ctgtatatcgagacagacggctcggagatgccggctgaaatagtggaacttcatgaaata
gaagtggagacgattccggtggaaacgatcgagaccacggtggtcgggggcgacgatgat
gacgagcaccagcccatgatcgcgctgcagccgctcgtaacagacgacccgaatcaggtc
caccatcaggaggtgatcctggtgcagacccgggaggaggtagtcggcggggacgagtcc
gatctgcggacagacgatgggtttgaggaccagatcctcatcccggtgcccgctcccggg
tcagaggaggagtacatcgggcagactctggtcacggtagctgggaagagttccatgggc
cggatgaagaaggggggaagcggtggaaagaaagcgggtaaaaagacatacctgagcgcc
ggagaagccactgggagaaaatgggagcaaaaacaggtgcagataaagactctggaggga
gaattctccgtgacgatgtgggcgtcggatgataaaaaggacattgaccatgaaacagtg
gtggaggagcagattattggagagaattctcctccagattactctgaatacatgactgga
aaaaagcttcctcccggtggcatcccgggcattgacctctctgaccccaaacagctcgcg
gaatttgccagtaacaatagcggctctttgggtcgcacttcagtacgaatgaaaccacga
aaggtcaaagaggatgatgcacccagaacgatagcctgtccccacaaaggatgcaccaag
atgttcagggataactctgcaatgaggaagcacctccatacccatgggccccgggttcat
gtgtgcgcagagtgcgggaaagcctttgtagagagttcaaaactaaagcgccaccaactt
gttcacaccggagaaaaacctttccagtgcactttcgagggctgcgggaaacgcttctcc
ctggactttaacctccgcacgcatgtacgaattcacactggagaccgcccatatgtctgt
cctttcgatggctgcaataaaaagtttgctcagtctaccaatctcaagtcgcacatccta
acacatgcaaaagccaaaaacaaccaatga
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