Ictalurus furcatus (blue catfish): 128601042
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Entry
128601042 CDS
T09387
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128601042 (taf1b)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
128601042 (taf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
HB_ELP1
Importin_rep_4
Paf67
DUF5816
Motif
Other DBs
NCBI-GeneID:
128601042
NCBI-ProteinID:
XP_053469894
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All DBs
Position
25:complement(1768355..1782580)
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AA seq
580 aa
AA seq
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MDEEITDGYSEPCGQCGSVCWGVTNGGQFFCKNCHNVIERMKEVEDMSRFTVNSRISSLS
SSKRKREVKGRAREWMICEGFQLILKLQAEALVDLGVCPQLKADVLWIFWKRYMQKTRQA
YTRNPVNILRGSVDQTSDTEVESSVAFSDASCYSETGSMMGASSVSGYSSDGRSSVCSGS
VDAECYFGQKDRKNLMTMPRTLAFCYLALLWVREAITLADLLRLVSKGHIPYVNAHALFP
EDMKFFGKDAMIFRVESIPSYSNVHRDAVSLAALIELPAFPPVTPDCLLHPALLSLRYLM
DANLPDKLHALVCEVIQKTSMGTDSFLTFDPTERKPRLPCYDLQAAALIVVCMKLLFRLD
DNVEWKLAKKSDEKINEMDHGKSKTTKRGGKMFSLRKWFMIVQPALERARKKEQQATAMQ
QWKSEKPIIPSLKHKTVVLKRRRVVEQLQSSFKALSGSAPEQQASTPSTFTFLWGDEDGA
DGPSLRHRCLDYLMMNKKRFWHFVNRKYWHTDLRRCYKRQCGDHFGELEPTLPRMYVWLL
GLFSFTLGVEDAKLHGAVVQVEQRLLRKTGHNETPENLDE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagataacggacggttacagtgaaccctgtggacagtgtggctcagtgtgt
tggggtgttacaaacggagggcagttcttctgtaaaaactgccataatgttattgagaga
atgaaagaagttgaggatatgagcagatttaccgtcaacagcaggatctcctctttatca
tcaagcaaacggaagcgggaggtaaaaggacgtgcgcgagaatggatgatttgcgaaggc
tttcagttgatccttaaacttcaggccgaagcgttggttgatctgggcgtctgccctcag
ttgaaggcagatgtgttatggattttctggaagcgatacatgcagaagaccaggcaggcg
tacacgagaaacccagtgaacattctcagaggttcagtggaccagaccagtgacaccgag
gtcgagtcatccgtcgctttcagcgacgcgtcatgttactctgagactggctcgatgatg
ggagccagcagcgtctctggatactccagtgatgggagatcttcagtgtgttcgggctct
gtggacgccgaatgctactttggacagaaagacaggaagaacctgatgaccatgccccga
acactagctttctgctatctggctctgctttgggtccgggaggccatcaccctggcggac
ttgctcaggttggtgtctaagggccacatcccttatgtcaatgctcatgcactttttcct
gaagacatgaagttctttggcaaggatgccatgatctttagagttgagtctatcccctct
tacagtaatgtacacagggacgcagtgagtctggcggcactgatcgagctgcctgctttc
cctcctgtgactccggactgcctccttcatccagctctgctcagtctacgctatttaatg
gatgctaaccttcctgacaagcttcatgcattagtttgtgaagtaatacagaaaacatct
atggggacagactcatttctgacctttgaccctactgagagaaagcctagactcccgtgc
tatgatcttcaggccgcagcgctcattgttgtgtgcatgaagcttctgttcaggctggac
gataatgtggagtggaagttggcaaagaaatcagatgaaaaaataaatgaaatggaccac
ggcaagagcaagacgaccaagcgaggtggaaagatgtttagtctgaggaaatggttcatg
attgtacagcctgcactggaacgagccaggaaaaaagaacagcaggcgacggccatgcaa
cagtggaaatctgagaagcccataataccgtctttgaaacataaaaccgtcgtactaaaa
cggagacgtgtggttgagcagctacagagcagtttcaaagctctttctggctcagctcca
gaacagcaggcttccaccccatccaccttcaccttcctctggggagacgaggatggagct
gatggacccagtctccgccacaggtgcctggactatctgatgatgaacaagaaaagattc
tggcactttgtcaaccgaaaatattggcacactgacttgaggagatgctataaacgtcag
tgtggggaccatttcggtgagctggagcctactttgcccaggatgtacgtgtggttgctg
ggactcttctctttcacgctgggtgtagaagatgcaaagctgcacggtgcggtcgtccag
gtcgaacaacggctactgagaaagacgggccacaacgagacaccagaaaacctcgacgaa
tga
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