Ictalurus furcatus (blue catfish): 128601173
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Entry
128601173 CDS
T09387
Symbol
sox11b
Name
(RefSeq) transcription factor SOX-11b
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128601173 (sox11b)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128601173 (sox11b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOA36
Nop14
RXT2_N
Sigma70_ner
Cwf_Cwc_15
CDC45
Motif
Other DBs
NCBI-GeneID:
128601173
NCBI-ProteinID:
XP_053470138
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Position
25:complement(2106547..2107919)
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AA seq
384 aa
AA seq
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MVQQSEHSETESGASREATDTEETEMSVCSPVPPKPDWCRTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQHMADYPDYKYRPKKK
PKLDNSSKPGALSPEKNGNKAVKAAAKKCTKMKPSKPGSVGVSARAAQDVRCSYAFTKVS
KSVKRELTDDEDDDEDDDDDEEDDDDDYDDESPVRFKAEDDEEHLRPYGVAKVPASPTLS
SAAESEGASMYEDPSSGRAHATAGSRLFYSFKNITKQQPHHASRAAALSPTPSFRSASIS
SSSCGEDADDLLVDFSLNLAAGGEPTSHASGNLCLSLVDKDLDSFSEGSLGSHFEFPDYC
TPELSEMIAGDWLEANFSDLVFTY
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggtacagcaaagtgagcacagcgagacggagagcggcgcgtcccgcgaggccacagac
acggaggaaaccgagatgagcgtctgcagccccgtgccgccaaaacccgactggtgccgg
acggccaccggccacatcaaacggcccatgaacgcgttcatggtgtggtcgaagatcgag
cggaggaagatcatggagcagtctccagacatgcacaacgcggagatctccaaaagactc
ggcaagcgctggaaaatgctaaaggacagcgagaagatcccgttcatccgggaagcagag
cggctgcgcctgcagcacatggccgactatccagactacaagtacagaccgaagaagaaa
ccaaagctggacaactcttccaaaccgggcgcgctgtcgccggagaaaaacggcaacaag
gctgtcaaagctgccgcaaagaagtgcacaaagatgaagcccagcaagccgggtagcgtc
ggcgtcagtgccagagccgcgcaagacgtccggtgcagctacgcgttcactaaagtcagc
aagtcggtcaagagggaacttacggacgacgaagacgacgatgaagacgacgacgacgat
gaagaagacgacgacgacgactacgatgacgagtctcccgtgcgctttaaagccgaggac
gacgaggagcacctgaggccgtacggtgtggccaaagtgccggcgagtcccacgctgagc
tcggccgccgagtcggagggcgcgagcatgtacgaggatccgtcgtccgggcgcgcgcac
gcaacagccggctcgagacttttttacagcttcaagaacatcacgaagcagcagccgcac
cacgcgagccgagccgctgcgctctcaccgactccgtctttccgctccgcgtccatctcg
tcgtcatcgtgcggggaggacgcggacgacttgctggtcgacttcagcttgaacctggcg
gcgggcggcgagccgaccagccacgcttcagggaacttgtgcctctctctggtggataag
gacttggactcgttcagcgagggcagcctcggatcccacttcgagttcccggactactgc
acgccagagctgagcgagatgatcgcaggggactggcttgaggccaacttctccgacttg
gtgttcacctactaa
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