Ictalurus furcatus (blue catfish): 128601189
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Entry
128601189 CDS
T09387
Symbol
spop
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128601189 (spop)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128601189 (spop)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128601189 (spop)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
128601189
NCBI-ProteinID:
XP_053470166
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Position
2:30607873..30731439
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMTSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtcccgagtccgccccctcccgctgagatgaccagcggccctgtggccgag
agctggtgttacacacagatcaaagtagtgaagttctcctacatgtggaccatcaacaac
ttcagcttctgtcgggaggagatgggcgaggtcatcaaaagctccaccttctcctcggga
gcaaacgacaaactcaaatggtgtttgcgggtgaatccgaaagggttggatgaggagagt
aaggattacttgtccctctatttgctcctggtaagctgtcccaagagcgaagtgcgtgca
aagtttaagttctccattctcaacgctaagggcgaggaaaccaaagcaatggagagtcag
cgggcctacagattcgtgcaaggcaaagactggggcttcaagaagtttataaggcgggac
ttcctactggatgaggccaatgggctgctaccagacgacaaactgacactcttctgtgag
gtgagcgtggtgcaggactcggtgaacatttctggacagaacacgatgaacatggtgaag
gttccggactgcagactggctgacgagctgggcggcttgtgggaacattcgcgcttcaca
gactgctcactctgcgtcgctggccaggagttccaggcacacaaagccatcctagcagct
cgttctcccgttttcagcgccatgttcgagcatgaaatggaggagagcaaaaagaaccga
gtggagattaacgacgtggagcccgaagtgttcaaggagatgatgtgttttatctacacc
ggaaaagcacctaacctggacaagatggctgacgacctgcttgctgctgctgacaagtat
gctctggagcgcttgaaggtgatgtgcgaggacgctctgtgtacgagcctgtctgtggag
aacgctgctgagatcctgattctggctgacctgcacagcgccgatcagctcaaaacccaa
gccgtcgactttatcaactaccatgcgtcagatgtgatggagacgtctggttggaagtcc
atggtggcgtctcaccctcacctggttgcggaggcgtaccgttccctggcgtcggcccag
tgcccctttctgggcccaccccgaaagcgtctcaaacagtcatag
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