Ictalurus furcatus (blue catfish): 128601254
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Entry
128601254 CDS
T09387
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128601254 (si:dkey-183n20.15)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128601254 (si:dkey-183n20.15)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128601254 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_3
vMSA
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
128601254
NCBI-ProteinID:
XP_053470282
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All DBs
Position
25:11590178..11595002
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AA seq
230 aa
AA seq
DB search
MLTCHNSCNRFLWISESRGHQLQGWYTSSSEDSQSGISASSMDRHCPVCLHVAIFPVETN
CGHLFCAPCLILYWKHSCCLEAISCPLCRQKVNVMYQLFHESRSDRKEQEVLGHVRDYNK
RYSGAPRQISDYLFDAPFFLLLLFRALGNLGGLVSLFLLRVALCGFGAAASFVSPLENMP
GHFSGALGLLDDLVVVFLLLIAIINIHQQMVPERTTRPHTVEHGILSDML
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgctcacctgtcacaactcctgtaataggtttttgtggatttcagagagcagaggtcat
cagctacaaggctggtacacaagcagtagtgaggactctcaatcaggcatatctgccagt
agcatggaccgccattgtcctgtatgtttacacgtagccatttttcctgtggagacaaac
tgtgggcatctattctgtgctccttgtcttatattgtattggaaacacagctgctgttta
gaggctatcagctgtcctttgtgcagacaaaaggtgaatgtcatgtatcagctgttccat
gagagcagatcagacaggaaagagcaagaggtattgggccatgttagagactacaataaa
cgctattctggagcaccacgacaaataagtgactacctttttgatgctcctttcttcctg
ctgcttttgttccgggctttgggaaacctaggaggtttggtgtcgctcttcctgctaaga
gtggcactgtgtggattcggggcagctgcatcctttgtgtctccattagagaatatgcct
ggacacttcagcggggcattggggcttttagatgacctagtggtagtcttcctcctcctc
atcgctatcattaatatccaccagcagatggtgccagagaggacaaccaggccacacaca
gtagaacatggaatcctgtcagacatgttgtaa
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integrated database retrieval system
