Ictalurus furcatus (blue catfish): 128601261
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Entry
128601261 CDS
T09387
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03320
PPAR signaling pathway
ifu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128601261 (rxrgb)
03320 PPAR signaling pathway
128601261 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128601261 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ifu03310
]
128601261 (rxrgb)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128601261 (rxrgb)
Nuclear receptors [BR:
ifu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
128601261 (rxrgb)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
MbnB_TglH_ChrH
Motif
Other DBs
NCBI-GeneID:
128601261
NCBI-ProteinID:
XP_053470297
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All DBs
Position
25:111382..136816
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AA seq
442 aa
AA seq
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MDNSDTYLHLNSPGALNSSLSQPPPMSSMMGHSSVISTSRPLPSAMGYSVITSSMSSPSA
SLPSTPAMDFGALNSPQMNSLSSVSSSEDVKPPPGLLPLANINSYQCTSPGSMSKHICAI
CGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKECLIDKRQRNRCQYCRYQKCLA
MGMKREAVQEERQRGKEKSDNEVESTSSFNEDMPVEKILDAELAVEPKTETHTDDSPGNS
TNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTV
KDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDA
KGLSNPADVEALREKVYASLESYTKQKYPNQPGRFAKLLLRLPALRSIGLKCLEHLFFFK
LIGDTPIDTFLMEMLEAPHQIT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagtgacacgtatttacatctcaactcacctggggcacttaactcctccctc
tcacagcctccaccaatgagctccatgatgggtcactcgtctgtcatcagcacctcacgt
cccctcccttcggctatgggctactcggtcatcacttcctctatgagctcgccctctgcc
tcactaccctccactcctgccatggactttggcgccctcaatagcccacagatgaactct
ctgagcagtgtgagcagctcagaagatgtgaagcctcctcctggtctgctgcctctggcc
aatatcaacagctaccagtgcaccagtcctggctccatgtccaaacacatctgcgccatc
tgtggtgatcgctcctcaggaaaacactatggtgtgtacagctgtgaggggtgcaaaggt
ttcttcaagaggaccatccggaaagacctgacctacacgtgtcgagacagcaaggagtgt
ctgattgataaacgccagcgcaatcgctgccaatactgccgctaccagaagtgtctggcc
atgggcatgaagagggaagcggttcaggaagagaggcagcgtgggaaggagaagagcgat
aatgaggtggagtcgaccagcagttttaacgaagacatgcctgtagagaagatcctggat
gccgagctcgcggtggagcccaagactgaaacgcacacagatgacagtccaggaaactct
acaaatgacccagtcactaacatctgccaagcagcagataagcagctcttcacactggtt
gaatgggctaaaaggataccgcacttctcagaccttcccctggatgatcaggtcattttg
cttcgggcaggctggaacgagctgctcatcgcctcgttctcgcatcgctcagtcacggta
aaagatggcattctgctggccacaggtctccatgtgcaccggagcagcgcacacagtgcc
ggagtgggttctatttttgacagagtgttgactgagctggtgtctaagatgaaagacatg
cagatggataagacggagctaggatgcctcagagccatcgttctttttaaccccgatgct
aaaggcctgtctaacccggctgatgtggaggcgcttagagaaaaagtctacgcctcgttg
gagtcctacaccaagcagaaataccccaaccagcccggcaggtttgctaagctcttacta
cgtctacccgctctccgttcgattggactgaagtgtctcgagcatctcttcttcttcaag
ctgatcggagacacgcccatagacaccttcctaatggagatgctggaagcaccccatcag
ataacatga
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