Ictalurus furcatus (blue catfish): 128601440
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Entry
128601440 CDS
T09387
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
128601440 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
ifu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128601440 (lrfn5b)
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GFIT
Motif
Pfam:
LRR_8
LRR_5
Ig_3
I-set
LRR_4
ig
Ig_2
LRR_9
V-set
C2-set_2
fn3
Sp38
LRR_Zer-1
Ig_5
Motif
Other DBs
NCBI-GeneID:
128601440
NCBI-ProteinID:
XP_053470623
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All DBs
Position
25:5948771..5959067
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AA seq
801 aa
AA seq
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METLFVYLMVMIMAVKAQKIQICPKRCICQVLPPNLATLCDKKGLLFVPPDIDRHTVELR
LGDNFITTVKRKDFANMTKLVDLTLSRNTIGSITPHAFNDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLMYIHIGAFNDLLALEELDLSYNNLESAPWVAIQHMTSLHTLS
LDHNMIDYIPEGTFSGLMKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGVLGPSSFALSF
GGNPLHCNCELLWLRRLRREDDLETCAAPQHLSGRYFWTVSEEEFLCEPPLITRHSQETR
ALEGQHVTLRCKARGDPDPVIHWIAPDGRLVSNSTRTVVHTDGTLDILISTVKDSGSFTC
VASNPSGEAQQTVQLFIIKLPHFTNDTSLVQEPDPGSSDIATSTKSGGDGGTAISNTKAG
QEKRVLISEITSSSALVKFNLQRNIPGIRMFQIQYNGTYDDSLVYSVMAFWKQQTVMIPP
TSKNILVNNLAAGTSYDLCVLAIYDDALTTLTATRVVGCVHFTTEPQYLRCHFMQSQFLG
GTIVVIIGGIIVASVLSFIIFLIVRYRVCNQEGEDKGVELGEIRSQSRSEQLQVCGIIKS
MSKQVLGVEMDACRKVSPQLESVATLGTTSGPGPRPSKPALPDCTVTTSAASHSWHPASP
NSQRPMHAASHKPAGVQKPDTQISVELDNTNKNNSAKVRPKSAQIRAYSTTVMPVSRRVQ
LDSSRYMTVPVGCMRVSRRHSLNVDSCKQTSYGSLPQQTGSLRSKRSLSMSGGDLPQLDV
SAKIHGKNSLSRSEWVLESTL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctatttgtttatctgatggtcatgatcatggcagtaaaagcccagaagatt
caaatatgtcccaaacgttgcatttgtcaagtgctgccacccaacttagccaccttatgt
gacaaaaaggggctgctttttgttcccccagacattgacagacacacagtagaactgcga
cttggtgacaattttatcacaactgtcaaaaggaaggactttgctaacatgaccaagctt
gtagacttgacactctccaggaacacaataggctctatcacacctcatgctttcaatgat
ctggagaacctgcgtgccctgcacttggacagcaaccgcctgacacgaatcacaaacgac
acctttagcggcatgtccaagctccatcatctcattctgaacaacaaccagctcatgtat
attcacataggagcctttaacgacctcctggcccttgaagagcttgatctctcctacaac
aatctagagagtgccccatgggtggccatccagcacatgactagcctgcacaccttaagt
ctggaccacaacatgatagactatatacctgagggcacattttcaggcctcatgaagctc
aaacgtttggatgttacttccaacaagcttcagaagcttccacctgatccagtcttccag
cgtgcaggtgttctggccacatcaggcgttttgggtccatcatcatttgcgctgagcttt
ggggggaacccattacactgcaactgcgagttgctgtggttgaggagactacggcgtgag
gatgacctggagacttgtgctgctccacagcacctctcgggacgttacttctggacggtg
tctgaagaggagttcctgtgtgagcctcccctcatcacacgtcattcccaggagacccgg
gcattggaaggccaacatgttactctgcgctgtaaagcacggggtgacccagatcctgtt
attcactggattgcccctgacggtagactcgtatccaactcaacccgaacagtggtgcac
actgatgggacactagatatcctcatcagcacagtgaaagattctggatcattcacatgc
gtggcatccaacccttctggagaagcacagcagactgttcagctatttattatcaaactg
ccacatttcactaatgacacaagcttagtacaggagccagatcctggctcctcagatatt
gctacatccaccaaatcaggtggagatggtggcactgccattagcaacaccaaagctggg
caggaaaaacgggtgctgatttctgaaattacatcctcctctgctctagtgaaatttaac
ttacaacggaatataccagggattcggatgttccaaatccaatacaatggaacctatgat
gactcgctagtctacagtgtaatggcattttggaagcagcaaactgtaatgatccctcct
accagtaaaaacatcctggtgaacaacttggcagctgggacgtcgtatgacctctgtgtg
cttgcaatctatgatgacgcattgaccactctcacagctacccgcgtggtggggtgtgtt
cactttacaacagaaccccagtacctccggtgccacttcatgcaatcacagttccttgga
ggtaccattgtagtcatcattggaggtatcattgtggcctcagtcttgtctttcatcatc
ttccttattgtacgttatcgagtgtgcaaccaggagggagaggacaagggagtagagctg
ggagaaattcgttctcagtccaggagcgagcagctgcaggtctgtggaatcatcaagtcc
atgtccaagcaagttctgggtgtggagatggatgcgtgtcggaaggtttctccacagctg
gagtcagtggccacattaggaacgacgtctgggcctgggcctcggccctctaaacctgcc
cttcctgactgcaccgttactacctctgctgccagtcacagctggcatcctgcctccccc
aactcccagcgtcccatgcatgctgcctcacacaaacctgcaggcgttcaaaaaccagac
acacagatcagtgtagaacttgacaataccaacaaaaacaactcagccaaggtgcgtccc
aaatctgcccaaatacgagcctactccaccacagtgatgccagtatccagaagggtacag
ctcgattcctcacgctacatgactgttccagtggggtgtatgagagtgagtcgcaggcat
tctctaaatgtagactcctgtaagcagaccagctatgggagtctcccgcagcagactggc
agccttcgctccaaacgcagtctgtccatgagtggtggagatcttccccagctggacgtt
tcagccaaaatccatggaaaaaactcattgtcaaggtcagaatgggttctagaaagcaca
ctttaa
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