Ictalurus furcatus (blue catfish): 128601763
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Entry
128601763 CDS
T09387
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03030
DNA replication
ifu03410
Base excision repair
ifu03420
Nucleotide excision repair
ifu03430
Mismatch repair
ifu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128601763 (pold1)
03410 Base excision repair
128601763 (pold1)
03420 Nucleotide excision repair
128601763 (pold1)
03430 Mismatch repair
128601763 (pold1)
03440 Homologous recombination
128601763 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifu03032
]
128601763 (pold1)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128601763 (pold1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128601763 (pold1)
DNA replication proteins [BR:
ifu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
128601763 (pold1)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
128601763 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
128601763 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
128601763
NCBI-ProteinID:
XP_053471104
LinkDB
All DBs
Position
2:complement(32520670..32540163)
Genome browser
AA seq
1105 aa
AA seq
DB search
MEFKRRNGGPPMGGASQAKRGKKSSEWEDGPSNFEEELALLDEIDMEMESVEGQAGHDVI
PVGDLFSADLNPRWRRPAAATLRPDKDTLVFQQIDLDYYLGSAVAGMPGQVQGKVPVVRM
FGVTDSGNSVCCHIHGFAPYFYVPAPAGFTNSHLAEFQKELNSAVLKDMRSNKDNISVTV
LAVDITRKESMYGYHGKRPLDFLRITMAMPRLVAPAKRILEQGFKFAHFSIQSYSAYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYKLREEKSTGETDSRDPGKVSLCQYEVDVGWTDLI
SHPTEGDWQRIAPLRVLSFDIECAGRKGVFPEAEVDPVIQIASMVQRQGEKEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFVRTVDPDVITGYNIQNFDLPYLLNRAAALKVN
YFPYLGRMRGIRSVLKDSSFQSKQMGRRENKTVNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQNLVMPVVKTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGQAEKLGLSSDDFIKTPTGDLFVKSSVRKGLL
PEILENLLSARKRAKTDLKKETDPFRKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTFANGYPADAKVIYGDTDSVMVKLGVDTVQEAMRVGR
EAAEWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSSSEHHDKMDCKGIETVRRDN
CPLVANLINMCLQKILIDRDPDGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTEY
YLEQQLSKPLLRIFEPILGETKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRNTCIGCK
AVLKTDTAMCDFCKKKESELYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLGDQEKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaagcggcgaaatggaggacctccgatgggcggagcctctcaggccaagagg
ggcaaaaagagttctgagtgggaggacggtccatcgaactttgaagaagagctcgccctt
cttgacgaaattgacatggagatggaatcggtggaagggcaggcgggccatgatgtcatc
ccagtgggtgatttattttcagcggatctgaacccacgctggcgccgtcctgccgccgca
actcttcggcccgataaagacacgctcgtcttccagcagattgacctcgactattatctg
ggttctgcagtggccgggatgcccggacaagtccaggggaaggttccggtggtgcgtatg
tttggagtgaccgacagtgggaacagcgtctgctgtcatatacatggttttgccccctac
ttctacgttcctgctccagccggcttcacgaattctcacctggcggagtttcagaaggag
ctgaactcggctgtgttgaaggacatgcgctccaacaaagacaacatctcagtcactgtg
ctcgcggtggacatcacgcgcaaagagagtatgtacggttaccacggcaagcgtccactg
gacttcctgcgcatcaccatggcgatgccgcgcctggttgccccggcgaaacgtatcctg
gagcaaggatttaagtttgctcacttctccattcagagctactctgcgtacgaggccaac
atcgacttcgagatcaggttcatggtggacagtgatgtggtgggatgctgctggatcgaa
ttgcctaaagggaagtacaaactaagagaggagaagagcacaggagagacggactcccga
gacccaggcaaggtgtctctgtgtcagtatgaggtggatgttggatggacagatttgatc
agtcacccaacagaaggggactggcagagaatcgctcctctgagggtcctcagcttcgac
atcgagtgtgcaggcagaaaaggtgtgtttccggaggctgaagtggacccggtgattcag
atcgcctccatggtgcagcgtcagggagagaaggagccttttatccgcactgttttcacc
ttacagagctgtgctagtatagtgggctctcagatcctctgcttcacccaagagaagcag
ctactacagagctgggcggagtttgtgaggactgtggatcctgatgtcattaccggctac
aatattcaaaactttgacttgccgtacctgctcaacagagccgctgctctaaaggtgaat
tatttcccctatctgggtcgtatgaggggcatcaggtcggtccttaaagactccagcttc
cagagcaagcagatgggccgcagagaaaacaaaaccgtcaacatggagggcagagtgcag
tttgaccttcttcaggtcctgctgagggattataaactgcgctcgtacacactcaacgcc
gtcagtttccacttcctgcaggagcagaaggaggatgtccagcactcgatcattacagac
ctgcagaatggaaatgagcagacgagacggcgtctggctgtctactgtctgaaagatgcc
tacttgcccctgcgcttgctgcagaagctgatgtgtgtgattaactacatggagatggca
agagtgactggcgtgcccctgacctacctcctgtctcgaggccagcagattaaagtcgtg
tcccagttactacgacaggccatgaagcagaacttggtgatgccggtagtaaagactgaa
ggtggggaggattatacaggagctacagtcattgagccagagaaagggtactacagtgtg
ccgattgccactctggatttttcctcgctgtacccatccattatgatggctcataacctg
tgttacactacgctactgcagaaaggccaagcagagaaactgggcctttcttcagacgac
ttcattaagactcctacgggagatctgtttgtcaaaagttcggtgaggaaggggctcctg
cccgagatcctggagaacctgctgagtgcccgtaagagggcgaagactgatctgaagaag
gagactgacccgttcaggaagcaggtgttagatggcaggcagctggctttaaagatcagc
gccaactctgtgtacggtttcactggtgcccaggtgggcaaactgccctgtctggagatc
tcacagagtgttacaggcttcggcaggcagatgattgaacagactaagcagcttgtggaa
tccaaatacaccttcgcgaatggatatccagctgatgccaaggtcatctatggagacaca
gactctgtgatggtgaaactgggagtggacacagtgcaggaggcgatgagagtagggagg
gaggcggctgagtgggtgtcctcacacttcgttcccccgatcaagctggagtttgagaag
gtgtactacccgtatttactgatcaataagaagaggtacgctggcctgtatttctcctcc
agttccgagcatcacgataagatggactgtaagggaatcgagactgtgaggcgagacaac
tgccccctagtggccaacctcatcaacatgtgccttcaaaaaatcctcatagaccgagat
cctgacggagctgtagctcatgctaaagaggtgatctcagaccttctgtgtaaccgcatt
gacatcagtcagctggtcatcaccaaggagttgacgcgcacggcgcaggagtacgcaggc
aagcaggcccacgtggaactcgcagagaggatgcgaaagcgggatgcaggcagcgctcct
aatcttggcgatcgagttccatatgttattatcaaggcagctaaaggagtagcagcgtac
atgaagtcagaggaccctatttatgtgctagagaacaacatccctattgacacggaatac
tacctcgagcagcagctgtctaaacctctgctgcgcatctttgagcctatactgggagaa
accaaagctgagagtgttttactcaagggagatcacacacgctgtaagactgttctgacc
tccagagtgggaggcctcatggcctttgcgcagaaacgtaacacgtgcattggctgcaaa
gcggttctcaaaacagacactgctatgtgtgatttctgcaagaagaaggagtcggagctc
taccagaaagagattgctcacctgtccaccctggaggagaaattctctcgtctgtggact
cagtgtcagcgctgccaagggtccctgcatgaagatgtgctgtgtaccagtcgagactgt
cctatcttctacatgaggaaaaaggttcagaaagacctcggggatcaggagaagctggtc
tcgcgtttcggctggtga
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