Ictalurus furcatus (blue catfish): 128601810
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Entry
128601810 CDS
T09387
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128601810 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128601810 (taf5)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128601810 (taf5)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128601810 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
128601810 (taf5)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128601810 (taf5)
STAGA complex
128601810 (taf5)
TFTC complex
128601810 (taf5)
SAGA complex
128601810 (taf5)
SLIK complex
128601810 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
VPS8_N
PROPPIN
PEP5_VPS11_N
LisH_PAC1
RAB3GAP2_N
LisH_TPL
DNA_Packaging_2
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
128601810
NCBI-ProteinID:
XP_053471173
LinkDB
All DBs
Position
26:complement(10400472..10410698)
Genome browser
AA seq
736 aa
AA seq
DB search
MAAVHDGPSDIESEKETKPDILGEKSAANLPGIMSGTLSSSSPLAPPSTVAPKAEEQQQT
LLAVLQFLKRNNLTESVDILRREAGLQDELEEARGTEAAAAGLNTGTGDASSLLSRVTSQ
SGAPAKGGEDQPDVRVVLSAYSQQGDPSLYQVYYSGLKKFIESVLDCHRAELSQLFYPLF
VHMYLELVYNNHENEAKAFFDKFSGDQECYYKDDLCVLSGLTKKEHMKGNETLLDFRTSR
FVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQIDSTSGSLAGEAR
REANKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKKPKKDSMGSKSKKQDPNAPQQ
NRIPLPELKDSDKLDKIMYMKEAAKRLRLGPETLPSICFYTFLNAYQGLTAVDITDDSSL
IAGGFADSTVRVWSVTPKKLRKVKSAADLSLIDKESDDVLERIMDEKTASESKILYGHSG
PVYAVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVAYKGHNYPVWDTQFSAHGYYFVSGG
HDRVARLWATDHHQPLRIFAGHLSDVTCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRI
LTGHKGPIHSLAFSPSGRYLASGSTDGRVLLWDIGHGLMIGELKGHSDTIYSLKYSRDGE
ILASSSMDNTVRLWDVTKAVDDVETDDFTAATGHIHLPDNSQEVLLGTYVTKSTAVIHVH
FTRRNLLLAAGAYTSQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcatgacggaccgagcgacatcgagagcgagaaagaaacaaaacccgac
attctgggcgagaagtcggcagcaaacctgcccggaataatgagcgggacgctctcctct
tcgtcgccgctcgcacctccttctaccgtagcaccgaaagcagaagagcagcagcaaact
ttactcgccgtgctgcagttcttgaagaggaacaacctaacggagtcggtagatatccta
cggcgcgaggcaggattacaggacgagctagaggaggcgcgcgggacagaagctgcagca
gcggggctgaacaccggcactggagacgctagctcactcctcagccgtgtgacttcccaa
agcggcgctccggctaaaggtggagaagaccagccagatgtccgcgttgtcctctcggca
tacagccagcagggggatccttcgttgtatcaggtgtactacagcgggctgaagaagttc
atcgagtcagtgctggactgccacagggccgagctgtcgcagctcttctacccgcttttt
gttcacatgtacctggagctggtttacaacaaccatgaaaacgaagcgaaggcgtttttc
gacaagttcagcggtgatcaggaatgctactacaaggacgatctgtgcgtgctctcaggc
ctcaccaagaaggagcacatgaagggtaacgagacgctgctggatttccgcacgagtcgc
ttcgtgctgcgcatttcacgcgactcctaccagctgctgaagcgccaccttcaggagcgc
cagaacaaccagatctggaacatcatccaggagcacctctacatcgacatcttcgacggc
atgccacgtagcaagagtcagatcgacagcacgtccggcagcctggctggagaagcccgc
cgagaggccaacaaagccaaggtgttctacggcttgctgaaggagccagagatcgaggtc
cctctcgacgacgaagacgaagaggctgagaacgaagagggcaaacccaagaagaagaaa
cccaagaaggacagcatgggttcgaaaagcaagaagcaggaccccaatgcaccacaacaa
aacaggattcctctaccagaactaaaggactcggacaaactggacaaaatcatgtacatg
aaagaggccgcgaagagacttcgtctaggcccagaaacactgccctcgatatgcttctac
acgttccttaatgcgtaccagggtctgacagcagtggacatcacagacgactcgagtctg
atagcaggaggctttgccgattccacagtgcgcgtgtggagcgtcacacccaagaaactg
cgaaaggtcaaatccgcagcagatctcagtctcatagacaaggagtcggacgatgtgtta
gaaaggatcatggacgagaaaacagccagcgaatccaaaatcctgtacggccacagcggg
ccagtgtacgccgtcagcttcagtccagacaggaattatctgctgtcgagttcagaagat
ggcaccatcaggctatggagcttgcagacatttacctgtctggttgcgtataagggacac
aattacccagtttgggacactcagttctctgcacacggatactattttgtgtctggagga
catgaccgagtggcacggttgtgggccactgaccaccaccagccactgcgtatattcgct
ggacatctctctgatgtcacctgcacccgcttccaccccaactccaactacgtggccaca
ggctcggccgatcgcaccgtgcgcctctgggacgtcctgaacggcaactgtgtccgcatt
cttaccggtcacaagggaccgatccactcgctggcgttctcgcccagcggtaggtacctg
gcgtccggctcaaccgacggcagagttctgctgtgggacatcggccacggactcatgatc
ggtgaactgaagggtcacagcgacacaatctactcactcaaatacagcagagatggagag
atccttgcatcaagctccatggacaacacggtccggctgtgggacgtcaccaaagctgtc
gacgacgtggaaacggacgatttcacagcagccacgggtcacattcacttacccgacaac
tctcaggaagtattgttggggacctacgtgaccaaatccaccgccgtcatccacgtccac
ttcaccagacgcaacctgctactggctgctggtgcatacacctcccagtga
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integrated database retrieval system
