Ictalurus furcatus (blue catfish): 128601847
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Entry
128601847 CDS
T09387
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128601847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128601847
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
Pre-60S particles
RNases
128601847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
Motif
Other DBs
NCBI-GeneID:
128601847
NCBI-ProteinID:
XP_053471217
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All DBs
Position
26:complement(19949125..19958137)
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AA seq
700 aa
AA seq
DB search
MVYKMVCVCMCWCSWCRLHQEDRVERVHVAVFEGVAQLHFYSHYSQFKHLRSKYTTRCTL
APSSGDLLSELFSCDLSAPDPSALSSSAFHTVPPTADVWYHPVVQRYGVKKKGMSSYLLT
EQERIKKNFPVKGGRGFESFVCTQADDHVTDSSPLYGLDCEMCITQEGPELTRVAVVTSK
GQCILDELVKPFNTVINYCTRFSGITRSMLKNVTTRLHDVQTKLVALLPGNAVLVGHSLD
NDLRALRLIHPHVIDTSLLYRKEFGQRFKLKLLAEIILKREIQSEQRGGHDPCEDAHAAL
DLAQYFITKGPRQVVECHLQDLWGVEPFPVNGALNGSVNTPTASSLLFGHALYKAGLPAL
FLGQSDALNGVSSNHLWRRHYWDSDKESVCVFRRVCQSYTLSVVQFSSLSEHLRKNPTEE
THMLQQMALRLKLMCVVFVGPLPHTYTEKNIHTLLKPYGTLRSVRLLHSTHTLHAVVEFQ
HLEGAQLALQSLPSLQVQDTVIKLQRPVNELTLDLEASLAELQNDIQNSHMIYVCGLSWR
HHHHDDLLKAFSAFGPICDITPARGSGKCPRHRHIKFVSSDSACAALSSVVHMGNRKLNM
CCTLTPPHMHTWTHTNPVTMETNREAAGSDERTGSEEAEPAGLTCAQDGGLQRVMRGLDR
NVGRMFRALERHTLSIVILPGIIRDKVEYPGLCFIQVKQD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggtgtataaaatggtgtgtgtgtgtatgtgttggtgcagttggtgtcgtctccatcag
gaggacagggtggagagggtgcacgtggccgtgttcgagggcgtggcccagctccacttc
tactcacactactctcagttcaaacacctccgctccaagtacactactagatgtacccta
gcgccctcctcaggcgacctcctgtccgaactcttcagctgtgacctctcagctcctgac
ccctcggccttgtctagttcagcgttccacacagtgccccctacagctgacgtgtggtat
caccccgtggttcagcgctacggtgtgaagaagaaagggatgagcagctacctgctgact
gagcaggagaggattaagaagaacttccctgtgaaaggtgggcggggcttcgagtcgttt
gtctgtacgcaggctgatgatcatgtgaccgacagcagccctctgtatggtctggactgt
gagatgtgtatcacacaggaaggtccagagctgacccgcgttgccgtggtgaccagcaag
gggcagtgtatattagacgagctggtgaaaccatttaacaccgtcatcaactactgcacc
aggttctcagggatcactcgctccatgctgaagaatgtaacaacacgacttcatgacgtc
cagacgaaactcgtggctctgttgccaggaaacgcagtgctggttggccactccctcgac
aacgacctgcgcgccctcagactgatccacccacacgtgattgacacgtcactgctctac
cgcaaagagtttggacaaagattcaagctgaagctgttagctgagatcattctgaagagg
gagattcagagtgaacagaggggaggtcatgacccatgtgaggatgcgcatgctgctctg
gaccttgctcaatatttcatcaccaagggaccgagacaggttgttgaatgtcatcttcag
gatctttggggagttgagccttttcctgtgaatggtgctctgaatggatcagtaaacaca
cccactgcaagttctctcctgtttggacacgccctttacaaggccggcctaccggctcta
tttcttggccaatcagatgcacttaatggtgtctcctccaatcatctgtggcgcagacat
tactgggactctgataaggagagtgtgtgtgtgtttcggcgtgtgtgtcagtcgtacact
ctcagtgtggtccagttctcatcactctcagaacatctgaggaaaaatccaacagaagaa
acacacatgctgcagcagatggcattgaggttaaaactgatgtgtgtggtgtttgtgggt
ccgttgccacacacttacacagagaagaacatacacacactgctgaagccctacggtaca
ctgcgctcagtcagactactgcacagcacacacacgctgcatgctgtagtagagtttcag
catttagaaggagctcaactcgctctgcagtctctccccagtctccaagtacaggacact
gtgataaagctgcagcgtccagtgaacgagctgactctggatctggaagcatctcttgct
gaactacagaacgacatccagaacagtcacatgatctatgtttgtgggttgtcatggcga
caccatcaccacgacgacctcctaaaggcttttagtgcatttggtcccatttgcgacatc
acgcctgccaggggttctgggaaatgtccaaggcacagacacatcaagtttgtcagctct
gacagtgcttgtgcggccctcagctcagtggtgcatatgggaaacaggaagttaaacatg
tgttgcactctcacaccaccacacatgcacacctggacacacacaaaccctgttactatg
gaaacaaacagagaggcagcaggttcggatgagcggacaggaagtgaggaggcggagcct
gcaggactcacctgtgcacaggatggagggctccagcgcgtgatgcggggattggacagg
aacgtggggagaatgttcagagcgctggagagacacactctcagcatcgtcatcctcccg
gggattataagagacaaagtggaatatcctggcctctgtttcattcaggtgaagcaggac
tag
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