KEGG   Ictalurus furcatus (blue catfish): 128601915
Entry
128601915         CDS       T09387                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03420  Nucleotide excision repair
ifu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128601915 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    128601915 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ifu04121]
    128601915 (cul4a)
   03400 DNA repair and recombination proteins [BR:ifu03400]
    128601915 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ifu04147]
    128601915 (cul4a)
Ubiquitin system [BR:ifu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     128601915 (cul4a)
DNA repair and recombination proteins [BR:ifu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      128601915 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      128601915 (cul4a)
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128601915 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 128601915
NCBI-ProteinID: XP_053471325
LinkDB
Position
26:complement(7637293..7667522)
AA seq 754 aa
MMAEESRQSRSAGFSALVENSNGVSKSPSSKSGTSKKLVIKNFKDRPKLTETYTEDTWLK
LRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPMLYKQLRQVCEDHVRAQIHQFREDS
LDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVGD
GAVQSRTVEGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFENRFLVETDRLYAA
EGQRLMLDRDVPEYLHHVARRLDEENDRVISYLDQSTQKPLISAVEKQLLGEHMTAILQK
GLSTLLDENRVTELTLLYQLFSKVKGGLPVLLQFWREYIKSFGGEIAGSPEKDKDMVQEL
LDFKDKMDNVAHTCFQRNEGFINAMKEAFESFINKRPNKPAELIAKYVDSKLRAGNKEAT
EEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGA
AFTSKLEGMFKDMELSKDIMIQFKQYMQNQSEPSNIDLTVNILTMGYWPTYTPMDVHLPS
EMVKLQEVFKTFYLGKHSGRKLQWQPTLGHAVLKSEFKEGKKELQVSLFQTLVLLMFNEG
EEFALEEIQTATGIEESELRRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKHKLF
RIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKF
PVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgatggcagaggagtcccgacagagcaggagcgcgggtttctcagctctggttgaaaac
agcaatggagtgagtaaaagcccgagctccaaatccggcacctcaaagaagctggtgatt
aaaaacttcaaagacagacccaagctgacggaaacctacaccgaggacacgtggctgaag
ttgcgcgatgccgtcggcgcgatccagaacagcacatcaatcaaatacaacttggaggag
ctttatcaggcagtggaaaatctttgctcttataaggtctcgcccatgttatacaaacaa
ctccggcaagtgtgtgaggatcacgtgcgagcacagatccaccagtttagagaagactcc
ctggacagtctgtcttttctgaagaggatgaacagatgctggcaagaccattgcagacaa
acaatcatgatccgtagcattttcctcttccttgatcgcacgtacgtcctccagaactcc
cttcttccgtccatatgggacacagggctggagctgtttcgcacacacatagtgggtgac
ggtgcagtccagagtcgtacagtagagggaattttggagcaaattgaacgagagaggaac
ggcgagactgtggatcggagtctcctgcgtagcttactaggcatgctctcagacctacag
gtgtataaggagtctttcgaaaacaggtttctggttgagacggatcgcttgtacgcagct
gagggccagagactgatgttagacagagatgtacctgaatacctgcaccatgtagcacgg
cgcctagacgaggagaacgatcgtgtcatcagttacctagatcagagcactcagaagccc
ctgatctctgcagtagagaagcagcttctgggtgaacacatgactgccattttacagaag
ggtctcagcacgctgttggatgagaaccgtgtgactgagctgactctgctgtaccagctc
ttcagcaaagtgaagggtggcctgcctgtattactgcagttctggagagagtacatcaag
agctttggtggtgagattgctggctctcctgagaaagataaggacatggtgcaggagctg
ctggattttaaggataaaatggacaacgtagcacacacctgcttccagaggaacgagggc
ttcatcaatgccatgaaggaggccttcgagagcttcattaacaagagacccaacaaacca
gcggagcttattgccaaatatgtagactccaaactacgtgccggtaacaaagaggccaca
gaagaggagctggagagaatcctcgacaagatcatgattatcttccgctttatccacggt
aaagacgtgtttgaagcgttctacaaaaaagacctagcgaagcgcttgctggtgggcaaa
agtgcctctgtggatgccgagaaatccatgctgtccaaactcaagcatgagtgtggggca
gcgttcaccagcaagctcgagggcatgttcaaagatatggaactctccaaagacattatg
atccagttcaaacagtacatgcagaatcagagtgaacccagcaacatcgatctgaccgtc
aacatcctcaccatgggctactggccaacctacacccccatggatgtccatctgccctct
gagatggtaaaacttcaggaggtgttcaaaacgttctatctcgggaagcacagtgggcga
aagcttcagtggcagcccacgctgggccatgcggtgcttaaatctgagtttaaagagggt
aaaaaggagctgcaggtatctttattccagacacttgttctgctcatgtttaatgaaggg
gaggagtttgcactagaagagatccaaacagctacaggaatagaggagagtgagctgaga
cgcacgctgcagtcgctggcatgcgggaaagctcgcgtacttaataaaaatcccagaggg
aaagacgtggaggacggagaccgcttcaacttcaacaacgacttcaaacataaactgttc
cgcattaagatcaaccaaattcagatgaaggagacggtagaggagcaggtgagcaccaca
gagcgggtcttccaggacaggcagtaccagatagatgccgcagtggtgaggatcatgaag
atgaggaagactctcagccacaatcttctggtgtcagaactctacaaccagctcaagttt
cctgtgaagccaggcgacctgaagaagcgcatcgagtccctcattgatcgagactacatg
gagagagacaaggagagccccaaccagtatcattacgttgcctga

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