Ictalurus furcatus (blue catfish): 128601990
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Entry
128601990 CDS
T09387
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04137
Mitophagy - animal
ifu04144
Endocytosis
ifu04145
Phagosome
ifu04148
Efferocytosis
ifu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128601990 (rab5c)
04145 Phagosome
128601990 (rab5c)
04137 Mitophagy - animal
128601990 (rab5c)
04148 Efferocytosis
128601990 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128601990 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128601990 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128601990 (rab5c)
04031 GTP-binding proteins [BR:
ifu04031
]
128601990 (rab5c)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
128601990 (rab5c)
Endosome - Lysosome transport
128601990 (rab5c)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128601990 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
128601990 (rab5c)
Exosomal proteins of colorectal cancer cells
128601990 (rab5c)
Exosomal proteins of bladder cancer cells
128601990 (rab5c)
GTP-binding proteins [BR:
ifu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
128601990 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
128601990
NCBI-ProteinID:
XP_053471454
LinkDB
All DBs
Position
2:33043881..33062225
Genome browser
AA seq
222 aa
AA seq
DB search
MAGRGGTTRTNGTTAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF
LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFTRAKNWVKE
LQRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI
AKKLPKNELQGGPGPGARARGGVDLQEAAPQGRSGQCCGGGN
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgaggaggaacgacgcggaccaacggcaccaccgccgccgccgccaacaag
atctgccagttcaagctggtgctgctgggagagtcggccgttggcaagtccagcctggta
ctgcgcttcgtcaagggccagttccacgagtaccaggagagcaccattggagccgcattc
ctcacacagacagtctgcctggatgatacaacagtaaagtttgagatttgggacacagcc
ggacaagagagataccacagtctggcaccaatgtactacagaggagcccaggctgccatc
gtagtctacgacatcactaacacagagactttcacccgagcaaagaactgggtaaaggag
ctccagagacaggccagccccaacatcgtcatcgctctggctgggaacaaagccgacctt
gctaacaagagagctgtggatttccaggaagcacaggcgtacgcagacgacaacagcctg
ctgttcatggagacatccgctaagaccgccatgaatgtcaacgagatcttcatggccatc
gctaagaagcttccgaagaatgagctacaggggggaccaggtcctggggcacgggctcgg
ggcggagtcgacctgcaggaggcggcacctcagggcagatccggccagtgctgcggagga
ggaaactaa
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