KEGG   Ictalurus furcatus (blue catfish): 128601990
Entry
128601990         CDS       T09387                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04137  Mitophagy - animal
ifu04144  Endocytosis
ifu04145  Phagosome
ifu04148  Efferocytosis
ifu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128601990 (rab5c)
   04145 Phagosome
    128601990 (rab5c)
   04137 Mitophagy - animal
    128601990 (rab5c)
   04148 Efferocytosis
    128601990 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128601990 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ifu04131]
    128601990 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ifu04147]
    128601990 (rab5c)
   04031 GTP-binding proteins [BR:ifu04031]
    128601990 (rab5c)
Membrane trafficking [BR:ifu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    128601990 (rab5c)
 Endosome - Lysosome transport
    128601990 (rab5c)
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128601990 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   128601990 (rab5c)
  Exosomal proteins of colorectal cancer cells
   128601990 (rab5c)
  Exosomal proteins of bladder cancer cells
   128601990 (rab5c)
GTP-binding proteins [BR:ifu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    128601990 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 128601990
NCBI-ProteinID: XP_053471454
LinkDB
Position
2:33043881..33062225
AA seq 222 aa
MAGRGGTTRTNGTTAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF
LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFTRAKNWVKE
LQRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI
AKKLPKNELQGGPGPGARARGGVDLQEAAPQGRSGQCCGGGN
NT seq 669 nt   +upstreamnt  +downstreamnt
atggcggggcgaggaggaacgacgcggaccaacggcaccaccgccgccgccgccaacaag
atctgccagttcaagctggtgctgctgggagagtcggccgttggcaagtccagcctggta
ctgcgcttcgtcaagggccagttccacgagtaccaggagagcaccattggagccgcattc
ctcacacagacagtctgcctggatgatacaacagtaaagtttgagatttgggacacagcc
ggacaagagagataccacagtctggcaccaatgtactacagaggagcccaggctgccatc
gtagtctacgacatcactaacacagagactttcacccgagcaaagaactgggtaaaggag
ctccagagacaggccagccccaacatcgtcatcgctctggctgggaacaaagccgacctt
gctaacaagagagctgtggatttccaggaagcacaggcgtacgcagacgacaacagcctg
ctgttcatggagacatccgctaagaccgccatgaatgtcaacgagatcttcatggccatc
gctaagaagcttccgaagaatgagctacaggggggaccaggtcctggggcacgggctcgg
ggcggagtcgacctgcaggaggcggcacctcagggcagatccggccagtgctgcggagga
ggaaactaa

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