Ictalurus furcatus (blue catfish): 128602114
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Entry
128602114 CDS
T09387
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128602114 (sorcs3a)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Others
Others
128602114 (sorcs3a)
Endosome - Lysosome transport
128602114 (sorcs3a)
Endosome - Golgi transport
128602114 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF443
Motif
Other DBs
NCBI-GeneID:
128602114
NCBI-ProteinID:
XP_053471651
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Position
26:complement(11094588..11391737)
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AA seq
1205 aa
AA seq
DB search
MDSLSGMYLTLCTWLVCSLHLCARAEVTCASCPSPALVKIGNVQNNARIIIPTAAGKSLL
NFARTRLQPVLEGVHELGKDASASGVPNSREVEVATRSLEPGSGEKTLPKQTTLGGQREY
EKVCKKDGALRRRKRSAAQLDEFGASARSGDSAESSDALLFVDGQNLRRNRDEGKVATSR
SEEPKVSSSTFALAGDSAHNHAVVYWTGQNSSVILILTKLYDFHLGSVTESSLWRSTDYG
TTYERLNDKVGVKTVLSYLYICPTNQRKVMVLTDPEFESSILISSDEGASYQKYRLSFYV
LSLLFHPSQEDWALAYSHDQKLYSSFDFGRKWHLVHERVTPNRFYWSVSGLDKEADLVHM
EAYTSDGHCQYMTCRAQACFESSRTFPFPGYIEPNSLVVQDDYIVIQVTMSGRATYYVSY
QRGPFARIKIPKYSLPKDMHILSTDQGQVFAAVQEWNQNDTYNLYISDPHGVYFTLALEN
VKTTRGLGGNSMIDLYEVAGIKGMLIANRKLENQVKTYITYNKGRDWRLLQAPTTDLEGN
EIYCVQPFCSLHLQLQMSENPYVSGSITTKNSVPGVIIAIGNMGSELSYSNVGMFMSSDA
GNTWRQIFDEEHNVWFLDKAGALLAVKQPTVPTRHFWISFDEGRQWTHHIFSAMPLFVDG
VLVEPGMENQILTFFGHFSDRSEWQLIKINYKSLFTKRCTEGDYQTWHLHNQGEPCVMGQ
KQIFIKRRPGNYCMMGKDTRILSAEPCICRAHDFECDYGYERRGDGNCLPAFWFNPSTVS
RSCSQGQNYFNSTGYRKVAANNCTKGVKEMYTARKQQCPNRPPRGLHLATRDNTLKANMG
SNVTFIVQLEEGDSMRTNIQLDFGDGTAVSYSNLSWTEEGIRHVYRSTGIFRVTAIAENS
LGSDSSSLYLHVTCPVEHVQLLAPFVVIKHKDVNLTAVVWPSHSRTLTYFWWLGNNTEPM
ITLEGSISYVFPVEGTYTVTVQVSSSNSILQDTKQIVVQEFFKSLLLSFSPNLDEANPDI
PEWRHDVGRIIKKAVLQVTDIPAEQLLVAIFPGLPTAAELFLLPSKNQSDSRKGSEDDLE
QISEILTNALNQNLVEFELKPGSGVIVYITQLTLAPLVDSIPRHSSSAMLMLLSVVILGL
TIFLIYKFKRKIPWINIYAEVNQEKEQEMIGTVGQNDTTPKIKLSEFSSPKELMEKDLEV
RVKRE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggactcgttatctggcatgtacttgactctgtgcacttggcttgtttgctctttgcat
ctttgtgccagagcggaggtaacttgcgcctcgtgcccgtccccagcgcttgtaaaaatt
gggaacgtccaaaacaatgcacgcatcatcattcccacagcggctgggaaatcacttctc
aatttcgcacgcacgagattgcaaccggttctggaaggagttcatgagttggggaaagac
gcgagcgcgagcggcgttccaaactcgagagaagtggaagtggcgacgcgctcactcgaa
cctggctccggtgaaaaaacactgcccaagcaaactacactggggggacagcgggaatat
gagaaagtgtgtaaaaaagacggtgcgttacggagacgcaaaaggagcgcggcgcaactg
gatgaatttggcgcaagcgcgcggagcggagattccgcagagtcctcagatgctctgctg
tttgtggatggacagaatctgcgacgcaaccgagacgagggaaaagtggccacttccagg
tcggaggaacccaaagtgagcagtagcactttcgccctggctggagactccgctcacaac
cacgctgtcgtttactggaccggacaaaacagcagcgtgattctgatcctgaccaagctt
tatgacttccacttgggcagtgtcactgaaagctccctatggagatcgacagactatggc
accacctatgagagactgaatgacaaagtgggagtgaagacagtcctgagttacctgtac
atctgtcccacaaaccaaagaaaggtaatggtgttgacagacccggagttcgaaagcagt
atcctcatcagctccgatgaaggggccagttaccagaaataccgtctcagtttctacgta
ttgagtctgctttttcacccttcacaagaggactgggctctggcctacagtcatgaccag
aagctgtacagctcgtttgactttggacggaagtggcatctcgttcacgagcgagtgacc
cccaaccgcttctattggtctgtaagtggtctggataaggaagccgatctggtgcacatg
gaggcgtacacttctgatggacattgtcagtatatgacatgcagggcccaggcttgtttt
gaatcaagtaggacgttcccattccccggctacatcgagccaaattcgctggtggttcag
gatgactacatcgtcattcaggtcaccatgtctgggagagccacttattatgtgtcttac
caaaggggaccttttgcgcgcatcaaaatacctaaatactctcttccaaaagacatgcac
atcctgagcacagatcaaggtcaggttttcgccgctgtgcaagagtggaaccagaacgat
acgtacaacctgtacatctcagatccgcatggtgtttacttcactctggctttggaaaat
gtcaagaccacccgcggtcttgggggcaacagtatgatagacctgtatgaggtagcagga
atcaaaggcatgctgattgctaatagaaaactggagaaccaggtgaagacgtacatcact
tacaacaagggccgggactggaggctgctgcaggcgcccactacggacctggagggtaac
gagatttactgtgtgcagccattttgttcgctacacctacagctgcagatgtcagaaaac
ccttatgtctctggaagtattaccaccaagaactctgtgccaggagtaatcatcgctata
ggcaatatgggctctgagctctcctacagtaatgtaggaatgttcatgtcatcagatgct
ggcaatacctggagacagatatttgatgaggagcacaatgtttggttcctggataaagca
ggagctctacttgcagtcaagcagcccacagttcccacaaggcatttctggatcagcttt
gatgaagggagacagtggacacatcatattttctcagccatgcctctgtttgtggatggt
gttctggtcgagccaggcatggagaatcagatcctgacgtttttcggacacttcagcgat
cgctctgagtggcagctgatcaaaatcaactacaagtccctgtttaccaagcgatgcact
gaaggagactaccaaacgtggcacttgcacaatcagggtgagccatgtgtaatgggccaa
aagcagatcttcatcaagcgccgcccgggcaactactgcatgatgggaaaggacaccagg
atcttatcggctgaaccttgtatctgtagagcacatgattttgagtgtgattatggctat
gagcggagaggagatggtaactgcctgcctgcattctggttcaatccttccactgtatca
cggagctgcagtcaaggccagaactatttcaacagcacaggttaccgcaaagtagcagca
aacaactgcaccaaaggggtgaaggagatgtacacagcaaggaaacagcagtgtcccaat
cgacccccacgaggattgcacctggcaacccgtgacaacaccctcaaagcaaatatgggc
tccaatgtcacctttatagtacaactggaagagggagactcgatgaggacgaatatccag
ttagacttcggggatgggacggctgtgtcctattctaacctcagctggacggaagagggt
atcagacatgtgtaccgcagcacaggaatcttccgggtcactgccatcgccgagaacagc
ctgggatctgactcaagctccctctacctgcatgtgacatgtcctgttgagcatgtccag
ttgttggctccatttgtggtcattaagcacaaggatgtgaacttgactgcagtggtctgg
ccctctcactctcgaactctcacttacttctggtggctggggaacaacacagagccaatg
atcactctagagggcagtatatcctacgtgtttccagtggaggggacgtacacggtaacg
gtgcaggtctcatcatccaactccattcttcaagacactaaacaaatcgttgtgcaagaa
ttctttaaatccctgcttttatctttttctccgaatctggatgaggccaaccctgacatc
ccggagtggaggcacgatgtaggcaggataattaaaaaggctgtgctccaagtaaccgat
attcctgctgagcagctcctggtggcaattttccctggactaccaacagctgctgagctt
ttcctgcttcccagcaagaaccagtcagacagcaggaaagggagcgaggatgatctggag
cagatctcagaaatcctcaccaatgcattgaaccagaacctggtggaatttgagctgaaa
ccaggatctggagttatcgtttacatcacacagctaacattagctccgctggtggactca
atccctagacacagcagttctgccatgctgatgctcctctctgtggtaatcttggggtta
accatcttcctcatttacaaattcaagagaaaaattccctggataaatatatacgctgag
gtgaaccaagagaaagagcaggagatgatcggcacagtgggtcagaacgacacgacaccc
aaaattaagctaagcgagttctccagccccaaagagcttatggagaaggatttggaagtc
cgtgttaaacgtgagtga
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