KEGG   Ictalurus furcatus (blue catfish): 128602218
Entry
128602218         CDS       T09387                                 
Symbol
eef1a1b
Name
(RefSeq) elongation factor 1-alpha 1b
  KO
K03231  elongation factor 1-alpha
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128602218 (eef1a1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifu03019]
    128602218 (eef1a1b)
   03016 Transfer RNA biogenesis [BR:ifu03016]
    128602218 (eef1a1b)
   03012 Translation factors [BR:ifu03012]
    128602218 (eef1a1b)
   04131 Membrane trafficking [BR:ifu04131]
    128602218 (eef1a1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ifu04147]
    128602218 (eef1a1b)
Messenger RNA biogenesis [BR:ifu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     128602218 (eef1a1b)
Transfer RNA biogenesis [BR:ifu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    128602218 (eef1a1b)
Translation factors [BR:ifu03012]
 Eukaryotic type
  Elongation factors
   128602218 (eef1a1b)
Membrane trafficking [BR:ifu04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    128602218 (eef1a1b)
Exosome [BR:ifu04147]
 Exosomal proteins
  Proteins found in most exosomes
   128602218 (eef1a1b)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Gtr1_RagA
Other DBs
NCBI-GeneID: 128602218
NCBI-ProteinID: XP_053471859
LinkDB
Position
26:14385249..14392027
AA seq 462 aa
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPETVAFVPISGWNGDNMLEASPNMTWFKGWKINRKEGSVSGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAASFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKTPTSGKITKSAQKAQKNK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggaaaggaaaagctgcacatcaatatagtggtcattggccatgtggactctgggaag
tccactaccaccgggcacctcatctataagtgtggtggcatcgacaagaggaccattgaa
aagtttgagaaggaggctgctgagatgggtaaaggttcttttaagtatgcatgggttctg
gataaactgaaggctgagcgggagcggggcatcacaattgatatctccctctggaagttt
gagaccagcaagtactacgtcaccatcattgatgcccctggacacagagactttattaag
aacatgatcactggtacctcccaggcggactgtgccgtgctaatcgtggcggcaggtgtg
ggcgagtttgaagccggcatctcgaagaacggtcagacccgagagcatgccctgctggca
tacacgctcggtgtgaagcagctgatcgtgggcgtcaacaagatggactccacagaacct
aattatagccagaagcgctatgaggagattgtgaaggaagtcagcacttacatcaagaag
attggatacaaccctgaaacagtggcctttgtgccaatctctggctggaatggagataac
atgctcgaggctagcccaaatatgacctggtttaaggggtggaagatcaaccgcaaggaa
gggagcgtctcaggaacgactctattagaggctctggatgccattcagcctccaacccgg
ccaactgacaaaccactgcgcctcccactccaggatgtttacaagattggagggatcggt
acagtcccagttggtcgcgttgagaccggtatcctgaaacctggcatggttgtgacattt
gcccctgtgaatgtgaccactgaggttaagtctgtagaaatgcatcacgaggccttgtct
gaggcgttgcctggtgataacgtgggatttaacgtgaaaaacgtgtccgtcaaagacatc
cgtcgtgggaacgtcgcaggagatagcaagaatgaccctccacaagaagctgctagtttc
actgcacaagtcataatcctgaaccaccctggccagatcagtgctggctatgctccagtg
ctggactgccatacggcccatatcgcctgcaagtttgctgagctgaaggagaagatcgac
cgtcgttcagggaagaagctagaggacaaccccaaatcgctcaagtctggtgatgctgcc
attgtggacatgatcccgggcaagcccatgtgtgttgagagcttctctgagtaccctcct
ctcgggcgcttcgccgtacgcgacatgcgtcagacggtggcagtgggcgtcattaagggt
gtggagaagaagacacccacttcaggcaagatcaccaagtctgcccagaaggcccagaag
aacaaatga

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