Ictalurus furcatus (blue catfish): 128602237
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Entry
128602237 CDS
T09387
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128602237 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128602237 (spast)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
128602237 (spast)
Membrane trafficking [BR:
ifu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128602237 (spast)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
128602237 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_22
RuvB_N
Vps4_C
TIP49
AAA_5
IstB_IS21
AAA_16
MIT
Mg_chelatase
AAA_14
AAA_24
DUF815
nSTAND3
AAA_2
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
128602237
NCBI-ProteinID:
XP_053471892
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All DBs
Position
26:complement(17323910..17335481)
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AA seq
597 aa
AA seq
DB search
MNSAPGSRVKSKKRTAARFGPEPEDTCDQEVLHHHHPERPPRFYNLRVLFSPLLVLYSVL
GLVVSGLCSLLAWFFKPICGVMATKPKQADGEDCDATGDLIKKHHKQAFEFISVALRIDE
DEKGQKDQAVQWYRKGITELEKGICIKVTGTGEKAERARRLQDKMNNNLIMAKERLQLLA
ELSSDSSQAVNTNSINSALSNGSLRPVALDKSVRSTNKSSSVVPKKTDSSSSLGKLKPAR
PSSSAPQRSTSFTAPAAGRTGPQANHKAPAGRGAARGSTKAGAAPSSTPQRKRDLKNFKN
VDSKLANLILNEIVDSGSAVRFEDVAGQELAKQALQEIVILPALRPELFTGLRAPARGLL
LFGPPGNGKTMLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVIF
IDEIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLRR
FAKRIYVTLPSEETRLKLLKNLLNKHGNPLTQKELNQLARMTNGYSGSDLTSLAKDAALG
PIRELRPEQVRNMAANEVRNIRFSDFVESLKKIKKSVSPQTLEQYARWNLDYGDTTV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagcgcctggaagcagagtgaagtcgaagaagagaaccgcagcccggttcggg
cctgaacccgaggacacctgtgaccaggaggtgcttcatcatcatcatcctgaacgtcct
ccacgtttctacaaccttcgagttcttttctctccgctcctggtcctctattcagtgctc
gggctggtggtgtcgggtctgtgttcacttttagcctggtttttcaagcccatctgcggc
gtcatggccaccaaaccgaagcaagcggacggtgaagactgcgatgccaccggagatctg
atcaaaaagcatcacaagcaggcgtttgagttcatctcagtggcgctgcgcatcgacgag
gatgagaaaggacagaaggatcaggcggtgcagtggtaccgtaagggcatcactgagctg
gaaaaaggcatctgcatcaaggtcacaggcactggggaaaaagcagaacgagccagacgg
cttcaagataaaatgaacaacaacttgatcatggccaaagagcgtctgcaactgctggcc
gagctgagctcagattcctcgcaggctgtaaacactaacagcattaactccgctctctcc
aacggcagcctccgcccagtcgcgttggataaaagcgtccgctcaacgaataaatctagc
agtgttgtacctaagaaaacagactcttcatcatctctggggaagctgaagcctgccaga
ccttcctccagcgccccccagcgctcaaccagcttcactgcaccagccgcaggccgaaca
ggaccccaggccaaccacaaggctccagcaggtcggggtgctgccagaggtagcactaaa
gctggcgctgctccttcctctactccacagaggaagagagacctgaagaactttaaaaat
gtggacagcaaactggccaacctcatcctcaacgagatagtggacagtggctcggcggtg
agattcgaggatgtagcaggtcaggagttggccaaacaggcactgcaggagatcgtgatc
ctgccggcactgcggcctgagttgtttacaggactgagagctccagcgagaggactgctg
ctgtttgggcctcctggtaacgggaagaccatgctggcgaaagctgttgccatggaatcc
aacgctaccttcttcaacatcagtgctgccagtctgacttctaaatacgtcggtgaaggt
gagaaactggtacgagctctgtttgctgttgcccgagaactgcagccatcagtcatcttc
attgatgaaatagacagtctcctgtgtgaaaggagagaaggagagcacgatgccagccgg
agactgaagactgagttcctcattgagtttgatggggtacagtcaggaggagatgaccgg
gtgctggtgatgggtgccacaaatcgtcctcaggagctggacgaggccgtgctcaggcgt
tttgcgaagaggatttacgtgaccttaccctcagaggagacgcggttgaagctgctgaag
aatctcctgaataaacatggcaatccactgacacagaaagagctgaatcagctagccagg
atgaccaatggttactcaggcagtgatctgacctccttggctaaagacgctgcactggga
cccatacgagagcttcgtccggagcaagtgaggaacatggcggcaaatgaggtgaggaac
attcgtttctcggatttcgtcgagtctctgaagaagatcaagaagagcgtcagtcctcaa
actctggagcagtacgcacgctggaacctggactatggagacaccactgtatga
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integrated database retrieval system
