Ictalurus furcatus (blue catfish): 128602259
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Entry
128602259 CDS
T09387
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128602259 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128602259 (prpf31)
Spliceosome [BR:
ifu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128602259 (prpf31)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
128602259
NCBI-ProteinID:
XP_053471967
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Position
1:complement(3149336..3154370)
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AA seq
510 aa
AA seq
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MSLADELLADLEEAGEEGEDGLYPGGEEDQIDGETVNRVGHGGLEDIPEEMETDFSSTEC
VTSIAKLRNSKSFAEIMDKIAQYVGNPRKNTDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFVRDKYSKRFPELESLVPNTLDYIRTVKELGNNLDKCKNNETLQQILTNATIMVV
SVTASTTQGTLLAEDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSVIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARQVSAKCALAARVDSFHESTDGKVGYELKEEIERKFDKWQEPPPVKQVKPLPAPL
DASRTKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKEGEAKA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagatgagctcttggctgatttggaggaagctggagaggaaggagaggac
ggactgtacccgggtggagaagaagaccagattgatggagaaactgtaaacagagtggga
catggaggactggaggacattccagaggagatggagacggacttcagcagtacggagtgt
gtgacttctatagcaaaactgcgcaacagtaaatcatttgctgagatcatggataagatt
gcgcagtacgtcgggaatccacgcaaaaacacagacgtttctgggccggtggaggccgat
cctgagtatcgtctcatcgtcgccgctaacaacctaacggtggagattgataacgaactg
aatattattcataagtttgtgcgtgataaatactcgaagagattcccggagctggagtcg
ctggtgccgaacacgctggattacataaggactgtcaaggagctggggaacaacctggac
aagtgtaagaacaatgaaacgctgcagcagattctgaccaacgccaccatcatggtggtc
agtgttaccgcctccaccacacagggtacgctcctggcagaggacgagctgcagcgactg
gaggaggcgtgcgacatggcgctcgagctcaaccaatcgaaacacaggatctacgaatac
gtcgagtcgaggatgtccttcatcgctccgaatctgtcagtcatcgtgggcgcctcgaca
gctgccaagatcatgggaatcgctggcggcctgacgaacctgtcaaagatgccggcgtgt
aacttaatgttgctgggagcgcagaggagaacgctgtctggattcagcagcacatcactg
ctccctcacacaggctacatctaccactgcgacgtggtgcagtccctccctccggatctg
aggaggaaggcggcacgtcaagtctcagccaagtgcgcacttgcggcccgtgtggacagt
tttcacgagagtacagatggcaaggtcggttatgaactgaaggaggagattgagcgtaaa
tttgataaatggcaggagccgccgcccgtcaaacaagtgaagcccctccccgccccgctc
gatgcgtcaaggacgaagagaggaggcaggaggtatcgtaagatgaaggagcgtttggga
ctcacagagatcagaaaacacgcgaacagaatgaccttcgctgagatcgaagacgacgcg
tatcaggaggatctgggcttcagcttggggcagctgggtaaatcgggcagcggcagggtg
agacaggcgcaggtcaacgacgccaccaaagctcgcatctccaaatccctgcagcggacg
ttgcagaagcagagcatgacgtatggagggaagtccaccgtcagagaccgatcttcagga
acgagctccagtgtggcattcactccattacagggtttggagatcgtcaatccgcaggct
gcagagaagaaggtggccgaagccaaccagaaatatttctccaacatggccgagttcctc
aaggtcaagaaagaaggagaagccaaagcgtga
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