Ictalurus furcatus (blue catfish): 128602350
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Entry
128602350 CDS
T09387
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128602350 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128602350 (vps8)
Membrane trafficking [BR:
ifu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128602350 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf_RING_Vps8_fungal
zf-C3HC4
PHD_4
ANAPC4_WD40
Beta-prop_HPS5
EIF3I
WDR55
zf-C3H2C3
Beta-prop_EML_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
128602350
NCBI-ProteinID:
XP_053472077
LinkDB
All DBs
Position
26:complement(13883385..14001162)
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AA seq
1417 aa
AA seq
DB search
MSESPDTRSLMSASSQLNLMEIDAIDDKEFDIPQVDTPPTLESILNEPEDEDEPFVLEDT
CLLNTENMDAHSCETSSLASSDSGDRAHLKRRRKAVETNATIHGSVLRHNVLKGISAQII
SAADKVDAGLPTAITVSSVIAVGTSHGLALVFDQNQALRLCLGTTATGAEYGAVSALTIN
HDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDLPTLAVCNDSGGSV
FELSFSRRVMGMRTCESRCLFSGSKGEVCCIEPLHAAPELKDHPITHYCLLAMASLTKIL
VIGLKPSLKVWMTFPYGKTDPASVPQLAWQFVAAQKAVNPILAFCRGDTVHFLLVKKDES
GTVHVIKQRQLQLNCDIISLTWLNPRTLVLMDSGEKLHAVDRPSQEELETLDLAEVQLVY
NSSHFKSLATGGNVSQALALVGEKACYQSVCSYGGQIVYLGTKSVHVMTLRNWRERVDHL
LKQEKYTEALSLAWSFHEGTAKAVLGLFGDPAKRKGVVADKMVEILFQYVERSLKKCPEQ
GKIQLLEQHFQDMIPVMVDYCLLLQRTDLLFNQIYSRLVENSVAKGVFLESLEPYILSER
IGCLTAPVMRDLLSYFQENGMMESVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMMYVFN
SGMNDYISPMEKLFQVIGPPLREGKPLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDL
VPQVKNQVFEFLIRLHSLEAIQEEEVYPYIRTLLHFDTREFLNVLALTFEDFKNDKQALE
YQQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSPD
DDSRHTERQQVLLELLQVGGMVQFDEGRLLTLAEKAEFFQICEFLYEQKHLYDQIIACYL
KDPLRKEEVYNYIHNILSMPGYSPEEKQTTWNKSLEHIKELVSINPAKAAELVAGHFISE
VEPIITALQDDHLVFQFLRKLLDPSDGQKPHAVRNLGPELHELLVDLMCRFSPRQVTPFL
ETSESYRLEETVKITKQHELHEATAYLLEKKGDVQGAFQVLLQTLKEKLNTLVQESSEAA
TPRSAREEEDVDYTPLARVEEALNDIITLCHRSSHGLNQQQREALWFPLLEVMMSPQKFL
KGPNAKDVSDALKELTMKVLNNMSSFIALPAIIQRILQDPVYGKGKLAEIQGLILGMLET
FNYEQTLLETTTNLLNSDLHWSLAHLRKAVSRGLYPRQDHCSICLQQYKRRQESEEEIII
FSCGHLYHCQCLQRKEQWVVGKDPGLAGDRVHSWSCYKCTSSQGARPGDRLLAEGRRVRS
TSLAQTKVTSVHRGTAAETHHRKELTEVTLDAQQTQAWDQLRCMYRGPSRLAILTELTHS
HSSERTGLLNPAHPGTGSIYHSENFSLKLSPPPMVEE
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcaccggatactcgcagtctgatgtcggcgtcctcacagctcaatttaatg
gaaatagatgctattgacgacaaagagttcgacatccctcaagttgacacgccaccgact
ttagagagtattctgaacgagcctgaagatgaggacgaacccttcgtcctggaggacacg
tgccttttgaacacagagaacatggatgcgcattcctgtgagacgtcctccctcgccagc
tcagacagtggagaccgtgcacacctaaagaggagaaggaaggcggtggagactaatgca
accatccacggctcagttctgagacacaacgtgctgaaaggcatctcggctcagatcatc
tccgccgcggacaaagttgatgcaggcttgccaacagcgatcaccgtatccagtgttatt
gctgtgggaacgtcgcatggcctcgctctggtgtttgatcagaaccaggcgctgaggctg
tgcttgggtaccacggcgacgggggcggagtacggcgcagtgtcagctctcactattaac
catgattgcacgcgtctgctttgtggcttcgctaaaggacagatcaccatgtgggatttg
gcaaacgggaagctcctgcgcaccatcaccgatgcccacccacccggcacggccattttg
cacgtcaagttcacagatctgccgacgctcgccgtgtgtaacgacagcggcgggtctgtg
tttgaactctcattcagcaggagggtgatggggatgaggacatgtgagtctcggtgtttg
ttcagcggcagtaagggggaagtgtgctgtattgagccgctgcatgcagcccctgagctt
aaagaccatcccattactcactactgcctgctggccatggcctcactcaccaagatccta
gtgattggactgaagccatctctaaaggtctggatgacttttccatacggcaagacagac
cctgccagcgtgccccagttggcatggcagtttgtagctgctcagaaagcagtgaacccc
atcctcgccttctgtagaggagacactgtccacttcctgctggtgaagaaggacgaatct
ggaactgtccatgtcatcaaacagcgacagctccaactcaactgtgacattatcagtctg
acatggctgaatcctcgcacgctggtgttgatggacagcggagagaagctgcatgcggtg
gaccggcccagtcaggaggagctggaaactctggacctggccgaggtgcagctcgtgtac
aacagcagtcattttaaatcgcttgctacagggggcaacgtcagccaggccctggcttta
gtgggagagaaggcgtgttatcagtctgtgtgcagctacggaggccagatcgtctacctg
ggaactaaatctgtccatgttatgaccctgagaaactggagagagcgcgtcgatcattta
ctgaagcaggagaagtataccgaagcgctctctttagcctggtctttccatgagggcaca
gccaaagcggtattgggtctgttcggcgaccctgccaagcggaagggagtggtggctgac
aagatggtggagatcttgttccagtatgtcgagcgctcgttaaagaagtgtcccgagcag
ggcaagatccagctgctggagcaacacttccaggacatgattcctgtcatggtggattac
tgtctgcttctgcagaggacagacctgctgtttaaccagatctactcgaggctggttgag
aactctgtggctaagggcgtcttcttggagagtctcgaaccgtacattctgagcgagcgg
attggctgcctgacagcgcccgtcatgagggacctcctaagttacttccaagaaaacggt
atgatggagagtgtggaaggctgcctggtgcacatggacatcaccaacctggatatacag
caggtggtgcagatgtgttgggataaccagctctacgatgccatgatgtatgtgttcaac
agtggcatgaacgattatatcagtcccatggagaaactttttcaggtgattggtcctcct
ctgcgagaaggcaaacctctcacagatgaacaggtggtcatgggaaataagctgctcgtc
tacattagttgttgtctagcaggacgagcctatcctttaggggacattccagaagacctt
gtgccacaagttaaaaatcaggtgtttgagttcctgattcgcctgcattcgttagaagcc
atccaggaggaggaggtgtatccgtacatccggaccctgctgcacttcgacacccgcgag
tttctcaacgttctagcgctgacgttcgaggattttaagaacgacaaacaggctctggag
taccagcaaaggatcgtggacattttactcaaggtcatggtggataactcggacttcacg
ccgtctcaggtgggctgcctgttcacctttctcgcccggcagctagccaaacccgacaac
accctcttcgtcaacaggaagttgtttgatcaggttctggagtttctgtgcagtccagac
gatgattccagacacacggagaggcagcaggtgctgttggagttactgcaggtgggaggc
atggtccagttcgacgaggggcggctcctcaccctggcggaaaaggcggaattttttcag
atctgcgagtttttgtatgagcagaagcatctgtacgatcaaatcattgcctgctacctg
aaggaccccttaagaaaggaggaggtttataactacatccataacatcctgtccatgcct
ggctacagcccagaggagaagcagaccacatggaacaaatccttagagcacattaaggag
ctggttagcattaaccctgcgaaagctgccgagttggtagcgggtcactttatcagcgag
gtcgagcctattatcaccgcactacaggatgatcatttggtgttccagttcctgaggaag
ttgctggatccaagtgatggacagaagccccatgctgttaggaatcttgggcctgagctc
cacgagctcctggtggacttgatgtgccgttttagtcctcgccaagtcacgcctttcctc
gagacgtccgagagctaccgcctggaggagactgtcaaaatcaccaagcagcacgagcta
catgaagccaccgcctacctgctggagaaaaaaggagatgtgcagggagccttccaagtg
ctgctacagacactgaaggagaagctgaatacactcgttcaggagagttcagaggcagcc
acgccgaggtctgcgagagaggaggaggatgtagattacaccccactggcgagggtggag
gaagccctgaatgacatcatcacgctgtgccaccggagctcacatgggcttaaccagcag
cagagagaggctctctggtttcctctcctagaggtgatgatgtctccacagaaattcctc
aaaggccctaatgccaaggatgtttctgatgccctgaaagagctcactatgaaggtgtta
aacaacatgtccagcttcatcgccctgcctgccatcatccagcgcatcctacaggatcca
gtgtatgggaagggcaagttagcagagatccagggcctcattctgggcatgttggaaact
ttcaactatgaacagactctgctggagaccaccaccaatcttctgaattcggacctgcac
tggtctctggcccacctgcggaaggccgtcagcaggggactctaccctcgacaggaccac
tgcagcatctgcctgcagcagtacaaaaggaggcaagagagtgaagaggagatcatcatc
ttcagctgtggtcacctgtatcactgtcagtgcctacagcggaaggagcaatgggttgtt
ggtaaagatcccggactcgcgggagatcgggttcactcgtggagctgttataagtgcact
tccagtcagggagctcgtcccggagaccgcctgctcgccgagggacgccgggtccgatcc
acttctctggcccagaccaaagtgacatccgtccatcggggaaccgccgccgagactcat
cacagaaaggagctgactgaagtgactttagacgcccagcagacgcaggcgtgggaccag
ctgcgctgcatgtacagaggaccctccagattggcgatccttacagaactcactcactcc
cacagcagcgagagaaccggcctgctgaaccccgcccacccaggaaccggaagcatctac
cacagtgaaaacttcagcctcaagctttctccaccaccaatggtggaggagtag
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