KEGG   Ictalurus furcatus (blue catfish): 128602430
Entry
128602430         CDS       T09387                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    128602430 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ifu03021]
    128602430 (taf5l)
   03036 Chromosome and associated proteins [BR:ifu03036]
    128602430 (taf5l)
Transcription machinery [BR:ifu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     128602430 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     128602430 (taf5l)
Chromosome and associated proteins [BR:ifu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     128602430 (taf5l)
    STAGA complex
     128602430 (taf5l)
    TFTC complex
     128602430 (taf5l)
    SAGA complex
     128602430 (taf5l)
    SLIK complex
     128602430 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd TFIID_NTD2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_EIPR1 Tricorn_2nd Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_HPS5 Cytochrom_D1 Tricorn_N eIF2A
Other DBs
NCBI-GeneID: 128602430
NCBI-ProteinID: XP_053472197
LinkDB
Position
26:16935108..16940404
AA seq 604 aa
MKRGRTEQIQHAVAQYLKRRQYADVDGSLKGAKLSQSAEEMAANLMVQTESSCGNVVSAA
PCQSDPQQYETQFSRLCSFLLEAEAPLGRDVSAVLFPLFLYLHLDMARCGLRGAVDAFFS
RFHSSFQQDAEQRAIVEHLRGVVTPQDVASNSKLCSLLDHKYVVHLTDEAYTYLLRYLQS
DDNSALCRVLSTHLQVEVSAVRRSDYQLYGAGLTTGNSTSMSCSGGWSGMDGTEGAESVD
ATAGLPPQNEAALEALQDCVRRVREGPPSLTTVCFYAFENTEQLLNAADVSPDSRLLAAA
FDNSALKLWSLRARKLKAGPRRANVSKIRLACDLVEEETEEEELGSEMKTLRGHSGPVYG
AAFLRDSSGLLSCSEDCTVRYWELRGFSNAAVYRGHAYPVWDVAVSPCGLYFCTASRDTT
ARLWTPARAHPLRLYAGHLADVDCVRFHPNSSYVATGSTDRTVRLWSTQHGGSVRLLTGH
RGPVLALAFSPDGRYLVSAGEDQRLRLWDLASGGVLKELRGHTGAITSLEFSPDSSLIAS
AALDNSVRVWDVRNAHGGGAVPPDGSSPELVGVYTGETSSVLNVRFSACNLLLVTGTAQE
KAEQ
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgaagcgtggccggacggagcagatccagcacgccgtggcgcagtacctgaagagacgg
cagtatgcggacgtggacgggtcgctgaaaggggccaagctgtctcaatctgccgaggag
atggcagccaacctcatggttcagacagagtccagctgtgggaacgtggtttccgcagct
ccgtgccagtcggaccctcagcagtacgagactcagttctccaggttatgcagctttctg
ctggaggcagaggcaccgttgggccgggacgtgagtgccgtgctctttcctctcttcctc
tacctgcacctggacatggcacgctgtggcctgaggggcgccgtcgacgccttcttcagc
cgcttccactcctccttccagcaagacgccgagcagagagccatcgtggagcatctccga
ggagtcgtcacgccgcaggacgtggcctccaactccaaactgtgctctctgttggatcac
aagtatgtggtgcacctgacagatgaggcctacacttacctgctgcgctacctccagagt
gatgacaacagcgccctctgcagggtgctcagcacacacctacaggtggaggtttctgct
gtgcggcgctctgactaccagctctacggggcggggctcactacaggaaactccacctcc
atgtcctgttccggcggctggtctggcatggatgggacagaaggggcggagtccgtagat
gccacagcggggttaccgcctcaaaacgaggccgccttggaggcgcttcaggactgcgtc
cggcgtgtgcgcgagggtcctccgtccctcaccacggtctgcttctacgccttcgagaac
acggagcagctgctaaacgccgcggatgtgtcacccgacagccgcctcctcgccgccgcc
ttcgacaactccgccctcaagctgtggagcctccgagccaggaagctgaaggcggggcct
cgtagggccaatgtgtcgaagatacgcctcgcctgtgacctagtggaggaggagacagag
gaggaggagttgggcagcgagatgaagaccctgcgcggccacagcggcccggtgtacggc
gcggcgttcctgcgagactcctcaggtctgctctcgtgctcggaggactgcacggtgcgg
tactgggagctgcgtggtttcagcaacgctgccgtgtaccgaggccacgcctaccccgta
tgggacgtagcggtcagtccgtgtggtctgtacttctgcacggcgtcacgcgacaccaca
gcacggctctggactccggcccgcgctcacccgcttcggctctacgccggacacctggcc
gacgtcgactgcgtgcgcttccacccaaactccagctacgtcgctacgggctcgaccgac
aggaccgtccggctgtggagcacgcagcacggcggctcggtgcgcctgctcacaggacac
cgaggccccgtactggcactcgccttctcgcccgacggcaggtatctggtgtctgcaggt
gaggaccagcggctgcggttatgggacttggcttcaggcggcgtgctgaaggagctgcgt
ggccacacgggcgccatcaccagcctggagttcagcccggacagctcgctcatcgcctcg
gccgctctggataactcggtgcgcgtctgggacgtgaggaacgcccacggcgggggcgcg
gtgcctccggacggctccagccccgagctggttggcgtttacacgggcgagacgagcagc
gtccttaacgtgcggttcagcgcctgcaacctgctcctggtcaccggaacggcgcaggag
aaagcggagcagtga

DBGET integrated database retrieval system