Ictalurus furcatus (blue catfish): 128602473
Help
Entry
128602473 CDS
T09387
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00310
Lysine degradation
ifu00514
Other types of O-glycan biosynthesis
ifu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128602473 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128602473 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ifu01003
]
128602473 (colgalt1b)
Enzymes [BR:
ifu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
128602473 (colgalt1b)
Glycosyltransferases [BR:
ifu01003
]
O-Glycan biosynthesis
O-linked Gal type
128602473 (colgalt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
IF4E
Motif
Other DBs
NCBI-GeneID:
128602473
NCBI-ProteinID:
XP_053472279
LinkDB
All DBs
Position
26:complement(19235723..19253633)
Genome browser
AA seq
595 aa
AA seq
DB search
MHRGALLLSAASALLVLALVLVPSLGYFPEERWSPESPLLAPRVLLALVCRNSEHSLPHV
LGAIDRLRYPKDRIAVWVATDHNADNTTAVLREWLVNVQSLYHYVEWRPQEEPSEYEDED
GPKHWSDLRYEHVMKLRQAALDTARQMWADYFLLVDCDNLLTNPDVLWKLMKENKTIVAP
MMESRAAYSNFWCGMTSQGYYRRTPDYMPIRHQERRGCFPVPMVHSTFLLDLRKQASSEL
NFFPPHPDYTWAFDDVIVFAFSARMADVQMYLCNRETYGHFPVALHSRNSLRDEAENFLH
TLLEVMVRGSPVEPSVYLSVPRKHPDKLGFDEVFMINLLRRPDRRERMLRTLWEQEITCK
IINAVDGKALNESQIRALGISMLPGYSDPYHGRPLTRGELGCFLSHYNIWTEIVERGLQT
SLVLEDDLRFELFFKRKLQKLMQDVEAEGLDWDLIYIGRKRMQTDDPEKPVPNVRNLVEA
DYSYWTLGYMISLQGANKLLRAEPLSKMLPVDEFLPVMYNKHPVEDYMSHYELRDLRAFS
VEPLLVYPTHYTGDPGYISDTETSTVWNNETVPTDWDRERPEKNRAMHSHATSDL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggggcgcgctgctgctctccgccgcctcggcgctgctcgtgctcgcgcttgtg
ctcgtgccgagtctggggtatttcccggaggagcgctggagccccgagtctcctctgctg
gctccgcgcgtgctgctcgcactggtgtgccgcaactcggagcactccctccctcatgtc
ctcggagccatcgaccgcctacgctaccccaaggaccgcatcgctgtgtgggtggcgacg
gaccacaacgcggacaacacgacggccgtcctgcgcgagtggctcgttaacgtgcagagt
ctgtaccactacgtggagtggaggccacaggaggagcccagcgagtatgaggatgaggac
ggcccgaagcactggagcgacctacgctatgagcacgtgatgaagctacgacaagcagcg
ctggacactgcgaggcagatgtgggccgattactttctgctggtggactgtgataatctt
ctcaccaaccctgatgtcctgtggaagctgatgaaggaaaataaaaccatcgtggcacca
atgatggagtccagagctgcgtactccaacttctggtgtggaatgacctctcagggctat
tacaggcgcacgccggactacatgcccataaggcatcaggagaggcgtggctgcttcccc
gtcccgatggttcactccaccttcctgctggatctgaggaaacaagcttccagtgagctg
aacttcttccccccacaccccgactacacctgggccttcgacgacgtcatcgtgttcgcc
ttctccgcccgcatggcagatgttcagatgtacctgtgtaaccgagagacttatgggcac
ttccccgtcgcgctgcacagccgtaattccttacgggatgaagcggagaacttcctgcac
accttgctggaggtcatggtgcgcggttctccggtggaaccctcggtgtatctctctgtc
cctcgtaagcaccctgataaactgggctttgatgaggtgttcatgattaacctgctgagg
cgtccggatcgtagagagagaatgttgaggactctgtgggagcaggagatcacctgcaag
atcataaacgcagtggacggcaaggcgctgaatgagagtcagatccgtgcgttagggatc
agcatgttgccgggttacagtgatccgtatcatggcaggccactcactagaggagaactt
ggctgcttcctgtcccactacaacatctggactgagatagtagagcgaggacttcagacg
tctctggttttggaagacgatttgcgcttcgaactcttctttaaaaggaaactgcagaaa
ctgatgcaggacgtggaggcagaaggactcgactgggatttaatttacatcgggaggaaa
aggatgcaaacggacgatccggagaaaccggttcccaacgtacgcaacctggtcgaagcc
gactattcctactggacgctgggctacatgatctcgttacaaggagccaataagctgctg
agggcggagcctctgagcaaaatgcttcctgtagacgagtttctgccggtcatgtacaac
aagcacccagtggaggactacatgtctcactatgagctgagggacctgcgggcgttctct
gtcgagccgttactcgtttacccaacgcactacacgggcgatccgggctacatcagcgac
accgagacgtccaccgtgtggaacaacgagaccgtacccaccgactgggaccgagagcgt
ccggaaaagaatcgtgccatgcactcgcacgctacctctgacctctga
DBGET
integrated database retrieval system
