Ictalurus furcatus (blue catfish): 128602524
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Entry
128602524 CDS
T09387
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128602524
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128602524
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
128602524
NCBI-ProteinID:
XP_053472368
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Position
26:complement(10169051..10200402)
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AA seq
862 aa
AA seq
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MGLKDHLDDGAGHILDLGLDPDYLHVKAVDRQVGADALSRMDRGSLDTSEEGAPSSGRCP
SSSRGDSEDSCGSDGEVEQGCTLAPSDRSARAVHPPLCRSPCLDLDSPGLPEVTQDNPNT
ENSLREYQTKLEFALKLGYAEDLVQLVLSKLGSDALINDILGELVKLGSKSDNDSGATTS
STSTSLSLASSGSSSSSACSFSDSTDLRCSESPSQSILDDKDNLRPIVVDGSNVAMSHGN
KEVFSCQGIQLAVDWFLERGHKDITVFVPAWRKEQSRPDALITDQEILRRLEKDKILVFT
PSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAVEKPEWKKFIDERLLMYSFVN
DKFMPPDDPLGRHGPSLENFLRKRPIIPEHKKQPCPYGKKCTYGHKCKFYHPERGTQPQR
AVADELRASAKTSAAKGTNESGLVKSHSVPGGSRNDKTGDGKRSHSKRQSDPSVRTLSYG
DVEDKLSSKTKADPQNSSLTLPPAPGGPPSCHTHTQDQREQLTCFSKSHAVPAFPQTDSY
PTCESPDLNYYSLVRGYSGLSLSTQRSPERPFLSDMDARFSSVASDCSSEGSASSDSYGT
VPPGERSCMSSPDSLLDDGLKCHHYHHLHHHRRQYPLPMFLPPPPNHHHQSRVLSPVPST
HPGYHHGMARGLSFTQDDQSPEPHFKHSVSYISPQVQHQMIGARSSCPGEYPPQSSPLSR
GLASTRLDSVSDSRLYERSPLLARKPFSDQERLASWEPYYQQPCYEPFTFQSLPENRQQA
WRVPWGQTPHHPSPPHPSHNPHQHQEPPVLGRYQESREKVFVNLCNIFPTELVRLVMGRY
PHVTDAQQLAAAILAEKSQAGY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggatgatggagcaggccacatcctcgacctggggctggat
ccggactatcttcatgtgaaggctgtagaccggcaggtcggtgcagatgccctttccaga
atggacaggggctcattggacaccagcgaggaaggagcacccagctctgggagatgtcct
tcttcgtcccggggtgactctgaggacagctgtggatctgatggcgaggtggagcagggc
tgtactcttgctccaagcgatagatcagctcgagctgtacatccgccactttgccgctct
ccatgtctggatctggattccccagggctgccggaagtgacgcaggataatccaaacact
gaaaattctctaagggagtaccagaccaagttggagttcgctctaaagctaggttatgct
gaggacttggtccaattggtattaagcaagctcgggtcagacgcgctaatcaatgacatc
ctaggggagctggtgaaacttggcagcaagtcagacaatgacagcggcgcgacgacttca
tccacttccacttctttgtctttagcgtcttccgggtcatcgtcgtcttcagcatgtagc
ttctcagactcgaccgatttgcgatgctctgaatcgccatcacagtcaatcctggatgac
aaggataacctacgtcccatagttgtggatggaagcaatgtagccatgagccatggcaac
aaggaggtgttttcttgccaaggtatacagcttgcagtggactggttccttgaacgtggc
cacaaagacatcacagtattcgtaccagcgtggagaaaagagcagtcccgaccagacgct
ctcatcacagatcaagagatcctgaggcgactggagaaggacaagatcctggtcttcaca
ccctctcgccgggtccaggggcgtagggtggtgtgctacgatgaccggttcatcgtcaag
ttggcttacgaatcggatggcatcattgtctccaatgacaactacagggatttggccgtg
gaaaaaccagagtggaagaagtttattgacgaacgacttctcatgtactcgtttgtcaat
gataagtttatgcctcctgatgatccccttggtcgccatggccccagccttgagaacttc
ctgagaaaaaggcctatcatcccagaacacaaaaaacagccttgtccatatggaaagaag
tgcacttatggtcacaagtgcaaattctaccacccagagcgtggcacccagccccagcgc
gccgtagccgacgagctgcgtgctagtgccaagacctctgcagccaaaggcacaaatgag
tccggccttgtgaaaagccacagtgttcctggaggctctcgtaatgataaaaccggtgac
ggaaagcgttcacactcaaagcggcagtcggaccccagtgtccgcaccctttcatacggt
gacgtggaggacaagctgagctccaaaaccaaagcagacccccagaacagcagcttgacc
ctaccccctgcaccaggtgggcccccttcctgccacactcacacacaagaccagagagaa
cagctgacatgcttttccaaaagtcatgcagtgccagctttccctcagacagactcctac
cccacctgtgagtctccggacctcaactactactcccttgttcgtggctactctggcctc
agcttgtccacccaaaggagcccagagcgacctttcctttctgatatggatgcacggttc
agttccgtggcatctgactgcagcagcgagggcagcgccagctctgattcgtatggcacg
gtgcctcctggtgagcgctcctgcatgagctcgcctgactcactgttggacgatgggctc
aagtgtcatcattaccaccacctccaccaccaccgcaggcagtacccgctgcccatgttc
ctgcctccaccacccaaccaccaccaccagagccgtgtgctctccccagtcccttcgact
cacccagggtaccatcacgggatggcccgcggactcagcttcacacaagacgaccagtct
ccggagccccacttcaagcactcagtgtcctacattagcccacaagttcagcaccagatg
atcggtgccagatccagttgtcctggagagtaccctcctcagagttccccactgagtcga
ggactggcatccacacgtcttgacagtgtgtctgactccaggctctatgagcgctcaccc
cttttggccaggaagcccttctcagaccaggagaggctggctagctgggagccatactat
cagcagccctgctatgagccattcacctttcagagcctcccagaaaacaggcagcaagca
tggcgggtgccttggggacaaactcctcatcatccttcgcctcctcatccatcccataat
ccccaccagcaccaggaaccacctgtcctcggtcgctaccaggaatcgcgtgagaaagta
tttgtcaacctgtgcaacatctttcccactgagcttgtgcgcctggtcatgggccgttat
cctcacgttaccgatgcccaacagctggcagccgctatcttggctgaaaagagccaggct
ggatactaa
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