Ictalurus furcatus (blue catfish): 128602788
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Entry
128602788 CDS
T09387
Symbol
snrnp70
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128602788 (snrnp70)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128602788 (snrnp70)
Spliceosome [BR:
ifu03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
128602788 (snrnp70)
Complex B
128602788 (snrnp70)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
128602788
NCBI-ProteinID:
XP_053472803
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All DBs
Position
2:complement(35395351..35406722)
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AA seq
515 aa
AA seq
DB search
MTQFLPPNLLALFAPRDPIPFLPQLEKLPHEKHHNQPYSGIAPFIKHFEDPRDAPPPTRA
ETREERLERKRREKMERRQTVVETELKLWDPHNDPNAQGDAFKTLFVARINYDTTESKLR
REFEVYGPIKRIYIVYNKRTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWHPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDRPIGSDRDRERGERRERSE
RSERSREPDREKERGERRRSRSRERRRRTRSRERERALGGGGEEGAGRRRERERERGGGG
GGGGGGGGGGGGDADAKPRERSRERDRDRERKRRSRSRERRRDRERGKGAEGGEEGAGGL
TDGMMGEGGERGMDESALGEQGRGDEGGPEGEERSRDRDRERDRDRDRKRSHRDKDRDRD
RERRRDRDRDRDREHKRDRGDRERREDRHGSLLPSMGENEGLGNGEEGDSSLPPQTEEGS
QDGMNAMMDQDSMQSGDGYASNENGYKMEAQGDEY
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtttctgcccccgaacctgctggccctgtttgccccgcgggatcccatcccg
ttcctgccgcagctggagaaacttccccacgagaagcatcacaaccagccttactccggc
atcgctcctttcatcaagcacttcgaggatcctcgagatgctcctccaccaacaagagct
gagacgcgagaggagagactggaaagaaagaggcgcgaaaagatggagaggaggcaaacg
gtcgtagaaaccgagctgaagttgtgggatcctcacaacgacccgaacgcacaaggggac
gctttcaagaccttattcgtggctcggattaattacgatacgactgagtccaaactgcgg
cgtgagtttgaggtctacggccccatcaaacgaatctacatcgtatacaacaagaggact
ggaaagccacgcggctacgctttcatcgagtacgaacacgagcgggacatgcattcggcc
tacaagcatgctgacggcaaaaagattgacgggcgcagagttcttgttgacgtagagaga
ggccgtaccgtgaagggatggcaccctcgtcggctgggtggaggtctgggtggtactagg
agaggtggagcagatgttaacatcaaacattctggtagagatgacacctcccgctatgat
gaccgaccaattggaagcgatagggatcgtgagcgcggagaacggcgagagcggagtgag
cggagcgagcggagccgcgaacccgacagagaaaaggagcgtggcgagcggcggcgatca
cgctcacgggagaggcgacgacgcacccgatcacgtgagcgtgaaagggcacttggggga
ggtggggaagagggtgccggccggcgcagggaacgagagagggagagaggtggaggtggt
ggtggtggtggtggaggaggaggaggaggaggaggagacgcagacgccaagccacgcgaa
agaagccgagagcgtgaccgggaccgagaacgcaaaagaaggagcaggagcagggagagg
aggagggacagggagcgagggaagggcgcagagggaggtgaagagggcgcaggcggtctg
actgacggcatgatgggagaaggaggagagcgagggatggacgagtctgccttgggtgag
cagggtcgaggagatgagggaggaccagagggagaagagcgaagcagagatagagacaga
gagagggacagggaccgggacaggaagcgtagtcaccgagataaagatagagaccgggac
agagaaaggaggcgggacagggaccgagaccgagatcgcgagcacaagcgagacaggggt
gatcgcgagcgtagagaggatcgacacggctctctacttccctctatgggtgagaacgaa
ggcttggggaacggagaagaaggggacagctctctcccgccgcagacggaggaaggttca
caggatggaatgaatgcgatgatggaccaggactccatgcagtctggagatggctatgct
tctaacgaaaacggctacaagatggaggcccagggtgatgagtattaa
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