Ictalurus furcatus (blue catfish): 128602791
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Entry
128602791 CDS
T09387
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04136
Autophagy - other
ifu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128602791 (atg13)
04136 Autophagy - other
128602791 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128602791 (atg13)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128602791 (atg13)
Membrane trafficking [BR:
ifu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128602791 (atg13)
Atg1 complex
128602791 (atg13)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128602791 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
128602791
NCBI-ProteinID:
XP_053472806
LinkDB
All DBs
Position
27:complement(5637114..5662692)
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AA seq
552 aa
AA seq
DB search
MMDSDLSPQDRKDLDKFIKFFVLKTVQVIVQARLGEKICTRSSSSPTGSDWFTLAIKDIP
EVTHEAKKALAGQLPSVGRSMCVEISLKTSEGDSMELETWCLEMNEKCEKDIKVSYTVYT
RLSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGKTFRALQGFQTV
RVGVVGTPIGTLTLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPLGNTALMHPCNY
RAPGEEEGGVYAGVEDSQEVCTTSFSTSPPSQCPCTVSQAHSKTPKPALMATLKFPVMGL
GFSQQLCTSRLSYQTPLLGPVDLCHPTNCTAAAHPHQIAVPGKEGGVPQVLVQPSHGTQA
DHGRVPSCPSADTPHPPPSSSSGDTDVLLRSEGKSVSPSDAPETTFTRKVGAFVNKPTTQ
VTTASLDLPFAAFAPRGYDLEENDPMVQPPSSPTPSSPLQDSLHSQSSSQSGGQAQDDFV
MVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLSIDVSAQSMAEDLDSLPEKLAIYEKN
IDEFDAFVDTLQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcgatctgagcccacaggacaggaaagacttggacaaattcatcaaattt
ttcgtcttgaagacagtgcaggtgatagtgcaggctcgtctgggcgagaagatctgcact
cgctcctcctcttcccccacaggctcagactggttcaccctggcaattaaagacattcca
gaggtgacccatgaagctaagaaagctctggctgggcagctgcccagtgtcgggcgctcc
atgtgtgtggaaatttccctgaaaacatcagagggggattcaatggagctggaaacatgg
tgcttggagatgaacgagaagtgtgaaaaggacattaaagtctcctacacggtttatacg
cgtctgtccctgcttctcaaatctctcctggccatcacgagagttactcctgcctacaaa
ctgtcacgcaaacaaggccacgattatgtcatcctgtataggatatattttggtgatgta
cagttaacaggacttggtgaaggtaagactttcagagcgttgcaaggtttccagacagta
cgtgtaggagttgtaggtactcccataggaaccctcacactctcctgtgcataccgcacc
aatctggctctcatgtcctccaggcagtttgagaggacgggccccatcatggggatcatc
atagaccacttcgtggaacgtccacttgggaacacggccctcatgcacccctgcaactac
agagctccaggtgaggaagagggaggggtttacgctggagtggaggattcacaggaagtg
tgcaccacctccttttccacttctccaccttctcagtgtccgtgtacagtaagtcaggca
catagtaaaactcctaaacctgctctgatggccactctgaagttccccgtgatggggctg
ggcttctcacagcaactttgcacttctcgtctgtcatatcagactcctctcctcgggcca
gtagatttgtgccatcctactaactgcactgctgctgcccacccacaccagattgctgtt
ccggggaaagaaggtggagtcccgcaggtgctggttcagcccagtcatggcactcaggca
gaccatgggcgtgtcccgtcctgcccctcagcagacacgccccatcctccaccctccagc
agcagcggcgatacagatgtgttgttgagaagtgaagggaagagtgtgtccccttcagat
gcccccgagacaaccttcaccaggaaagtgggagccttcgtcaacaaacccaccacacag
gtgaccactgccagtctggatctgccgtttgctgcatttgctcccagaggttatgacctg
gaggagaacgacccgatggtacagccgccatcatcacccaccccctcctctccattacaa
gacagtcttcactcacagagctccagccagagtggaggccaagcacaagacgattttgtc
atggttgattttaaaccagcgttctctaaggacgacctcctcccgatggacctgggcact
ttttaccgagagtttcagaatcctccccaactcacaagcctttccatcgatgtcagtgcg
cagtctatggctgaagacttggactctctgccagagaagctggccatctacgagaagaac
attgatgagttcgatgcatttgtggacacactacagtag
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