Ictalurus furcatus (blue catfish): 128602842
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Entry
128602842 CDS
T09387
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128602842 (lingo1b)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128602842 (lingo1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRR_9
LRRNT
LRR_EndoS
V-set
Motif
Other DBs
NCBI-GeneID:
128602842
NCBI-ProteinID:
XP_053472886
LinkDB
All DBs
Position
27:complement(10079691..10123333)
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AA seq
622 aa
AA seq
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MTFLQVTSRMVAGVVSGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVLCH
RRKLVALPEGIPIETRLLDLSKNRLKAINPEEFINYPHLEDLQLNENVISVIETGAFSNL
FGLRTLGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLKELEVGDSE
LVFISHRAFHGLNSLEQLTMERCNMTSVPTEAFSHLHTLLVLKLWHFNVNLIRDFSFRRL
YRLKVLEITNWPFLEALTDKSLHGLNITTLSVTHCNLTAIPYVAIQHLVYLRSLNFSFNP
IEIVEGNKLHNLMRLQVFDLVGGRLVTIEPYSFRGLNYLKVLNISSNSLSTLEESAFHSV
GNLETLALYDNPLACDCRLLWVFRRRWRLNFNKQQPSCAAPEFVQGKEFKDFPDILPANY
FTCQKSKIRDHKPLQRFVDEGTTVRFACQADGDPTPVIMWQSPRKQFITTKSVGRLSVSL
DGTLEVRYAQIQDNGTYTCIATNAGGNDTKLAHLHVHSYSPNWPHQPNKTFAFISNQPNE
SGANETGRSVPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRRVEGQTSPTEETHKIRMKMM
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacatttctgcaggtaaccagcagaatggtggctggcgtggtgagtgggcacagctac
ctggtggcatgctggcagcccattcttatcctgatgctgggcactgtgctatcgggttcc
accacaggatgcccgtctcgctgtgagtgcaatgcccaggagcgctctgtgctgtgccac
cgcaggaagctggttgcccttccagaaggaatccctattgagacgcgactgttggacctg
agcaaaaaccgtttgaaagccatcaacccagaggagttcatcaactatccccacctggag
gacctgcagcttaatgagaatgtcatctcagtcatcgagacgggtgcattcagtaatctc
tttggattacggacgttaggactacgcaacaacaaactgaagctcattcagctgggtgta
tttactggtttgagtaacctcaccaggctggatataagtgagaataaaatagttatcttg
ttggattacatgtttcaggacctttacaatctaaaagaactggaagtgggagatagtgag
ctggtcttcatctctcatagagcctttcatggactcaatagtttagagcagcttaccatg
gagaggtgcaacatgacctcagtgcccacagaggccttcagccatctccataccctgtta
gtactcaagttgtggcattttaatgtcaacctcattagggatttttccttcaggagactc
taccgactaaaagtgttagagataacaaattggccctttcttgaagccttgaccgataag
tccctgcacggactcaacattaccacactgagtgtcacacactgcaacctcactgccatc
ccatatgtggccatccagcaccttgtgtaccttcgatctctcaatttttcattcaatccc
atagagattgtggagggcaacaaactgcacaacttgatgaggctgcaggtatttgactta
gtagggggtcgattggtcactattgagccttactctttcagaggactgaactaccttaag
gttctcaacatttccagcaatagcttgagcactttagaagagtctgcctttcactcagtt
ggtaaccttgagaccttggccctatatgacaaccccttggcatgtgactgtcgcttgtta
tgggttttccgtcggcgctggaggctcaatttcaacaagcagcagccatcttgtgctgcc
cctgagtttgtgcaagggaaagagtttaaagatttcccagatattctccctgctaattat
ttcacgtgccagaaatctaagatccgggaccacaaaccccttcagagatttgtggatgaa
gggaccacagttcgttttgcatgccaagcagatggggacccaacccctgtgatcatgtgg
cagtctcctcggaagcaattcatcaccaccaaaagtgttggacgtctgtcagtgtctctg
gatggcaccctggaagtacgatatgcccaaatacaagacaatggcacatatacatgtatc
gcgaccaatgcagggggaaatgacaccaagcttgctcatttacatgttcatagttattca
cccaactggccccatcagcctaataagacatttgctttcatctccaaccagcccaatgaa
agtggtgccaatgagactggtagatcagtcccatttccatttgatatgaagactcttatc
attgctactacaatgggatttatttctttccttggagtggttttgttttgtcttgtactc
ctctttctttggagtcgggggaaaggtaacgccaagccaaacatcgaaattgagtatgtg
ccacgtagagtagaggggcagaccagtccaactgaggaaacccataaaatcagaatgaaa
atgatgtaa
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