Ictalurus furcatus (blue catfish): 128602912
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Entry
128602912 CDS
T09387
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04142
Lysosome biogenesis
ifu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128602912 (vps35)
04142 Lysosome biogenesis
128602912 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128602912 (vps35)
Membrane trafficking [BR:
ifu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
128602912 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
VPS35L_N
FerA
YmgB
Motif
Other DBs
NCBI-GeneID:
128602912
NCBI-ProteinID:
XP_053473020
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All DBs
Position
27:complement(17324797..17353678)
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQAEEEMTGDINDSI
DFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKYKQ
IVLAGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQHVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPERVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKH
FPPLFEYFDYESRKSMSCYVLSNTLDYNTTILVQEQVDAILSLVSTLIQDQPDQPAEDPD
PEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQLA
FRYKDNASSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSGRNTDKNGDEIRDGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQ
RESPESEGPAYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccactcagcagtcaccccaggacgagcaggagaagctgttggacgaggcgatc
caggccgtcaaagtgcagtccttccagatgaaacgctgcctggacaagaacaagctgatg
gatgcactgaaacacgcctctaacatgctgggggagctcaggacctccatgctgtctcct
aaaagctactacgaactgtacatggccatatcggacgagctgcactacctggaggtttac
ctgactgacgagttcgctaagggccgtaaagtggctgacctgtatgagctcgtacagtac
gccgggaacatcatccccagactgtacttgttgataacggtgggagtggtgtacgtgcgc
tcgttccctcagtcgcgcaaggacattttgaaggatctggtggagatgtgtcggggtgtt
cagcatcctctgagaggtctgttcctgaggaactacctgctgcagtgcacacgcaacatc
ctgcccgacgacggagaacaggccgaggaggagatgaccggcgacatcaacgactcgatt
gactttgtcctgctgaactttgctgagatgaataagctgtgggtgcgaatgcagcaccag
ggccacagtcgtgaccgcgaaaagcgggagaaggagcggcaggagctgcgcatcctcgtc
ggcacaaacctcgtccgactcagccagctcgagggcgtcaacgtcgagaaatacaaacag
attgttctggctggagtcctggagcaggtggtgaactgcagagattctctggcacaggag
tacctcatggagtgtattatacaggttttcccagacgagttccacctccagaccctgaac
ccatttctccgagcgtgtgctgagctccaccagcacgtcaatgtcaagaacatcatcata
gctcttattgacaggttggctctgtttgctcacagagaagatggacctggaatccctgct
gagatcaaactctttgatattttctcccagcaagtggccacagtcatccagtctcgtcag
gacatgccgtcggaggacgtcgtgtctctgcaggtgtccctcattaacctggctatgaag
tgctaccctgagcgcgtcgactacgtagacaaggttctcgagagcaccgtggagatcttc
aacaaactcaacctggagcacattgcgacgagcagcgccgtatcgaaggagctcaccagg
ctgctgaagatccctgtggacacctacaacaacatcctgacggtcctgcagctcaaacac
ttcccgccgctcttcgagtacttcgattacgagtcacgcaagagcatgagctgctacgtg
ctcagcaacacgctggactacaacaccaccatcctggtccaggagcaggtggatgcgatc
ctgagcctggtgtccacactgatccaggatcagccagatcagcctgcagaggatcccgac
ccggaggactttgcagaggagcagagtttagtgggccgcttcatccaccttctgcattcc
gaagatccggaccaacagtacctgatattaaacacagccaggaagcacttcggagccggg
ggtaatcagaggatccgctacacgctgcccccactggtgttcgccgcttatcagctggcc
ttccgctacaaagacaacgcctcctcggacgataagtgggagaagaagtgccagaagatc
ttctccttcgcccatcagaccatcagcgcgctgatcaaggccgagctggccgagctgccg
ctgcgtctcttcctgcagggggcgctcgccgccggagagatcggcttcgagaaccacgag
accgtcgcctacgagttcatgtcccaggcgttctctctgtatgaggatgagatcagtgac
tccaaggcccagcttgctgccatcacgctgatcatcgggacgttcgagcgcatgcgctgt
ttcagcgaggagaaccacgagcctctgagaacccagtgcgctctcgctgcctccaaactg
ctgaaaaaacctgaccagtgccgcgccgtcagcatctgtgctcacctcttctggtccgga
cgcaacactgacaaaaacggagatgagatccgtgacgggaagcgtgtgatggaatgcttg
aagaaggccctgaagatcgccaaccagtgcatggacccgtctctgcaggtgcagctgttc
atcgagatcctcaaccgctacgtgtgtttctacgagcgcgagaacgacgcggtgaccgtt
caggtcctgaaccagttgatccagaagatccgtgaggacctgcccaacctggaggcgagc
gaggagacggagcagatcaacaaacacttccacaacacactggagcacctgcgcctgcag
agggagtcgcccgagtcagagggccccgcctacgaggggctggtgctgtag
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