Ictalurus furcatus (blue catfish): 128602984
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Entry
128602984 CDS
T09387
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04514
Cell adhesion molecules
ifu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128602984 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128602984 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128602984 (cdh5)
04090 CD molecules [BR:
ifu04090
]
128602984 (cdh5)
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Major cadherins
128602984 (cdh5)
CD molecules [BR:
ifu04090
]
Proteins
128602984 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Cadherin_3
Wzz
Motif
Other DBs
NCBI-GeneID:
128602984
NCBI-ProteinID:
XP_053473128
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All DBs
Position
27:19082159..19097187
Genome browser
AA seq
757 aa
AA seq
DB search
MMMMRAAVRTFLWTAFLHFLFTAAEHVKDISPSSVLRREKREWKWNTFHTSEEKPPQLLP
ETIGKLKNTLFINNAEFKLSGEGAGDIFSVNKAGEVLVLKKLDRERVSSYTLTAHLIDPK
SGMKLDKDTEFIIKVDDINDNPPQFSDTIPGSVIERANKGVVVLTVHATDKDDPNTANGI
VTYSLLNGTDFFSINSENGKIYTKVDTLDRETQSEYKLVVQASDMPGVAGGRSVTTTATI
TITDANDNHAAFSKQHYHFNVNEDAPVGSKFGILDIIDRDEKQNKKPKFAVDSAVRDIFD
LELNDNNDGVLVLKQDLDYEKKERYTFTVTLTEDVVQPPDNSDVLTRAQVHITVKDVDES
PVFTQAEYIFKVYENKEKIIVGSVSAKDTDKTNHRIRYSIKDPTSPVNINSETGQLTLKN
TLDREAQNEHKFFVTAEEESPNKLNSYTTVKLIVLDVNDNIPELANGTNVYICENDQSGT
VIGVIGATDKDENPGKFRFSLRGKSSNFSLYDNLNNTASIILTHGGFSTERSVENVLEIK
ITDGGYPELHSITHLLLQVCKCGRERRQEYCQAYSQSRVSVSALIAILLCIITILVIVIL
FVLRKHYQKKSVIALGKASGEIHEQLMAYDEEGGGEMDTNIYDVSILTSARSDARLGPDP
RPPAMYAIVKKPSACKGDMAVMIEVKKDEADHDRDGTPYDTLHIYGYEGSESLAGSLSSL
QSSSSCGSDLDYDILNDWGPRFRTLAQIYGSDVNTSY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgcgcgctgcggtcaggactttcctctggacagcgtttctgcactttctt
ttcaccgcagctgaacatgttaaagacatttcaccgtcctccgtcctgcgtagagagaaa
cgagagtggaagtggaacacgtttcatacatctgaggaaaaaccacctcaacttctaccg
gagacgatcggcaagctgaagaacactttgttcataaataatgcggagttcaagctctcg
ggagaaggagcaggagacatcttcagcgtgaacaaggccggagaagtgctcgtgttgaag
aagctggatcgggaacgtgtcagcagctatactctaacagcacacctcatagaccctaaa
agtggaatgaagctcgataaggacactgagttcatcataaaggtcgacgacattaatgat
aaccccccccagttctccgacactatccctgggtctgttattgaacgagcaaataaagga
gttgtggtgttgacggtgcatgcgaccgataaagacgacccgaacactgccaacggcatc
gtcacgtacagtctgctgaacggaaccgacttcttcagcattaacagtgaaaacggtaaa
atttacactaaggttgacacactggatcgtgagactcagagtgagtataagttggtggtg
caggcgtcggacatgcccggagtagcaggaggacgttcagtgaccactacagcgaccatc
actataaccgacgctaatgacaatcatgccgcgttctcgaaacaacactaccacttcaat
gtgaacgaggacgcgccagtggggtccaaattcggaatactggacattatagaccgtgat
gagaaacagaataaaaaacccaagtttgctgtagattctgctgttagagacatctttgat
ctggagctaaacgataataacgatggagttctcgtattgaagcaggatctcgactatgag
aagaaggagaggtatacgtttacagtaacacttacagaggatgttgtccaacctccggac
aactcggacgtcctgacgagggcacaggtccacatcaccgttaaagacgtggacgagtcg
ccggtcttcacccaggcagaatacatctttaaagtttacgaaaataaggaaaagatcatc
gtgggatcagtttcagccaaggacacagacaaaaccaaccacaggatacggtacagcata
aaggatcctaccagtccggtgaacattaacagtgagacaggacagctcactctgaagaac
actctggaccgagaagcccagaatgagcacaagttcttcgttacagcagaggaagaatct
cccaacaaactgaactcttatacgacggtgaaattaatcgtcctggacgtgaacgacaac
ataccagaactggccaacgggaccaacgtgtacatctgtgagaacgatcagagcggaacg
gttatcggtgttattggtgccactgacaaggatgagaatcctgggaaatttcgtttcagt
ctcagaggaaagagttcaaacttctccctttatgacaatctgaataatacagccagcatc
attctgactcacggcggtttcagcactgagagatctgtggagaatgttctggaaatcaag
attacagacggaggatatccggaactgcacagcatcacacatcttctcctgcaggtgtgt
aagtgtgggagagagagacgacaggagtactgccaggcctacagccagtccagagtcagt
gtgagcgctctcatcgccatcctgctctgcatcatcaccatccttgtgatcgtgattctc
ttcgtgctgcgtaaacactaccagaagaagtcagtcatcgctctgggaaaagcgtctggg
gagattcacgagcagctcatggcgtatgatgaagaaggtggaggagaaatggacacgaac
atatacgacgtctccatcctgacctcggctcgttcggacgcccggctcggtcccgatcca
cgtcctccggccatgtacgccatcgtgaagaagccttcagcctgtaaaggggacatggcg
gtgatgatcgaggtgaaaaaggacgaggccgatcacgaccgggacggaactccctacgac
acgctgcacatttacggctatgaggggtccgagtccctggctggctcgctgagttcactc
caatcgtcttcttcctgcggatctgacctcgattacgacattctgaacgactggggaccc
cgattcaggacactggctcaaatttacggctctgacgtgaacacttcgtactga
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