Ictalurus furcatus (blue catfish): 128602985
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Entry
128602985 CDS
T09387
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128602985 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Cadherin related
128602985 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Cadherin_pro
EGF
He_PIG
hEGF
Y_Y_Y
Laminin_G_3
cEGF
Motif
Other DBs
NCBI-GeneID:
128602985
NCBI-ProteinID:
XP_053473130
LinkDB
All DBs
Position
27:10600771..10870918
Genome browser
AA seq
2907 aa
AA seq
DB search
MIWAVFISYCMTFVLGNKTDERTPFFHGHVFENSPPGSRVNGLSIPARRIDAQRWCSGSS
AYLKLLGDGSDDFRVFAHHGRGHVQLKTASVLDREERAEYVLDVGLCCASCGSPERVVSR
VASVRVDVLDTNDHEPAFRHADVKISLDDATALRSVVYKVAAEDTDSGKNAELIYYALPR
NGSFYVVPKTGEVLLVDSILGLASPIKFSVFARDRGWPSRTGRHMKVEISPRQWPAAFPP
SSRLLRKSRSVLEPSEPVSVSVSEDAAIGSVIMNLNPVRFQSASFEQLYPETESSPVTVS
RESGELVISRSLDRETEPVVEITVKVQDKRGPDWYLLRVELTVLDVNDNAPEWTMVPFPY
LAVVSPSAAPSTLVYKLTARDGDEGINGEVEYFLSDGGDGRFEVDRKTGHVRTTGLPLQR
DREYLLTIMAADRLGSRSLPAILSVIAGLRAPQFTNASYTISIPENTLEGQPFLVTPALS
FQKEPISYSLLINPSSLFSIDQESGEISLTRSLDYETDQHRYLLLVRASENKESLSSAAE
VRVIITDENDCVPEFLQSIYSKEGVPETVTTATSLLQVSASDCDSEQNADITYYTLSSDF
IISPHGTIFPAGALDYERPNHLYEFVVMAVDKGEVPRTGTATVRLRMANVNDEPPEFSQP
VYRTFVSEDAGPNTLVATVLAKDPDGDGITYKISAGNEEGNFVIDSQKGLIRLRSNPQPK
LQGVEYILNITATDDNASGGPQSLSATAQVIVGVDDVNNNKPIFEKCQQYKEMASVPENK
PAGTFVLQVHAVDADEGANGKVTYGFMHKDSMVPAFNIDPDTGAITTARKFDRERQREYA
VTVTATDQAADPLIGICQLNILILDENDNSPKFENLRYEYFLREDTMIGTSFLRVAAHDD
DYSTNAAITYSMSKEQPEYLRVNPVTGWVYVNQPISQRTYITREIIATDGGNRSSSVELA
VTITNVKNQPPQWEKESYEVVIPENTVRDTPIVTVKATSPLGDPRVTYNLEDGMVPETNM
PVRFYLTPNREDGSASILVAEPLDYETTRNFMLRVRAQNVAAVPLAAFTTVYVNLTDVND
NVPFFTSSIYEASVTEGVEVGTLVLQVSANDLDLGLNGKISYSLLNDRSGDYQFFRIDPE
LGSIYTEAVFDRETKGSYLLEVNSMDGWESARPGRHGQPNSDTAYVRIFISDVNDNKPVF
AQTVYEVDVDEDADVGFTILTVNANDEDEGANAKLRYQITAGNTGGVFDVEPEVGTIFIA
QPLDYEQTKRYKLYVLASDGKWEDYTAVVVNIVNKNDEAPVFSVNEYYGSVTEELDGSPV
FVLQVTATDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLDREARAVWRFVVL
ATDESGEGLTGFTDVIISVWDINDNAPIFACAPDNCHGDVAENSPPGTSVMEMTATDLDD
AAVGQNAILTYRIVGNAALSGGNSGVDMFTINPATGTISLAKAGLDREQTESYLLVVEAR
DGGGMTGTATAAIHVTDVNDHAPRFLDRSCSARIPESSEPNSALLDLVAEDADAGENGQL
TFSVVSGDPEQKFYMVSHRQEQRGTLRLKKRLDFERPGEQRFNLTIKVEDLDYSSLLYCT
LEVEDCNDHAPVFIPHFLQIPDLREDVLIGTSVASVVASDSDSGLNREITYSIAPESDPY
ALFSVDQTGLVTVARQLDREITAQHNLIILATDHGTPPLTGTATIYISLLDVNDNGPEFE
SAYSPVVWENVPGPQLVHLNTSSMLLRAVDRDSAENGSPFSFSVPPEYRYSNDFYLQDNR
NDTATITALRAFDRERQKEFLLPVIMTDSGQPPKTVTSTLTITIGDKNDHAHVAGEKTIY
LNSHRGRMPTSVLGKVYAPDPDDWDNKTYAFEGHVPNYFILNKRTGFLVIKENAPPGTYD
FQVRVSDGEWPDAVSSVRVHVRELRDEIIYNSASLRLAEITAKEFMEQRGGLRSRYELLG
DFLSEMLSVGADDVNIFSLIEVRDRTLDVRFSVHSTPFQRAERLHGYLAAHKQKLQSFLQ
VNVTQVHVDECVAVDCSGGGGCTNRLIVSEKPSVVDSDSMALVSVTLESTAVCSCSAREH
LHQGCSTYPRNPCHNGGVCVDTQNGYRCQCPGQFDGPECQQTKHSFHGNGYAWFPPLRPC
FESHLSLEFITEVADGLLLYSGPLAPLQPWEPEDFMAIELIDGTPTLKINHGSGTLVLQL
PGNVNVADRRWHRLDVRSNSKDVRFTLDRCAGATVMEMEGVGSWLTTEDHTSCEVLGVTP
NLDRHLNGMQVLQLGGVNENVPYIYPQLQHKHFTGCISNLVVDSKVYDLSSPADSSGSSP
GCSMTDRSCMNMGFPSCGTRGRCHGEWGSFSCQCIAGYSGHQCEQELPEYSFDGRSYVHY
QLSGPLQARHTQVQVLIRTRKHSSSILSLLSSAQNEYIRLEIFQGLLAVFYNLGDGDFNL
TMLSHRLDNGEWHEVHLERHDNEMTLSVDGGGGRREVTGSPGRSREIIIDPSLVMLGNSF
PTGHNKSFQGCMRDLRLNGRSMPLDAQPKDGVLVLSTVGVTLGCSSDSCRRNQCSPPFTC
VDLWRIHECRCPPGHMVKANATGKFCVYTLCASRPCHRGTCVAQSPSKFTCECPEGYRGR
HCEVTLAIYHDDVGLSFRSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHVSAHH
DGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYSRSRALHHYHAPIQQ
QQHHLHQSDPPSRAPTATSTSSVSSSSTTVRRDVPLNHAPAQGQCAAPAAARTTQLARKS
LSFSSQDLARYLCEIIRDAEQHADSAPADSLQVFSTEGGGSPAGSLSSFSSAGLDESSAA
GHECLKDWGPRFDKLRALYERAEASDL
NT seq
8724 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggctgtttttatatcctattgcatgacttttgtcttgggaaataagacagac
gagaggacgccgttcttccacggacacgtgtttgaaaactccccgccgggctcgagggtg
aacggactgagcatcccggcgaggcgcatcgacgcgcagcgttggtgctccggctcgagc
gcgtacctgaagttactcggagatgggagcgatgactttcgggttttcgcgcaccacgga
cgcgggcacgtgcagctgaaaactgccagcgtgttggaccgagaagagcgcgcggagtac
gtgctggatgtgggcctgtgttgcgcaagctgcggttcgcccgaacgcgtcgtgtcgcgt
gtggcgtccgtgcgggtggacgtcctcgacacgaacgaccacgagcccgcttttcggcac
gcggacgtcaaaatatctctagatgatgccactgctctcaggtcggtggtttacaaagtg
gcagcagaagatacggatagcggcaagaacgctgagctcatctattacgcgctgccgaga
aacgggagcttctacgtggtgcccaaaacgggtgaagttcttctcgtggactccatcctc
gggctcgcgtcgcccataaagttcagcgtgtttgccagagaccgcggatggccgtcgcgc
acagggcgccacatgaaggtggagatcagtccccggcagtggccggctgcgtttccacca
tcatccagactcctgagaaagtctcgctccgttctggagcccagcgagcccgtgagcgtg
agtgtgtctgaagacgcagccatcggctctgtgatcatgaacctgaacccggtccggttt
cagtcggctagtttcgagcagctttaccccgagacggaaagctcaccggtcactgttagc
agagagagcggggagttggtgatctcgagaagcttggaccgggaaactgaacctgtagtg
gaaattactgttaaagtgcaggataaaagaggtcccgactggtatttgctaagagttgag
cttacagtcctggatgtcaatgacaatgctccagaatggacaatggtacccttcccctac
ctggcagtggtgtctcccagcgcagcccccagcacactcgtgtacaagctcacggctcgg
gacggtgatgagggaatcaatggagaggtggaatactttctgtctgatggtggtgatggc
cgatttgaggtggacagaaagacgggtcatgtgcggaccacgggtttgcctctgcagagg
gacagagaatatttactgaccatcatggctgctgaccgcctggggagtcgcagtcttcct
gccatcctttccgtgatagcaggactcagagcgccacaatttaccaacgcctcctacaca
atatccatacccgaaaacacgcttgagggacagccctttctggtcactccggcattgtct
ttccaaaaggagccaatcagctacagcttgcttatcaaccccagcagcctgttcagcatt
gatcaagaaagtggagagatcagcctgacccgcagtcttgactatgagactgaccagcac
cgctacctgctgcttgtgagagccagcgagaacaaggagagcctgagcagtgctgcagag
gtacgtgtcatcatcacagatgagaatgactgtgttccagagttcctgcagtccatttat
agcaaagaaggtgtcccagaaacagtaacgacagcaacgtctctgcttcaagtgtcagcc
agtgactgtgactcggaacagaatgctgacatcacttactacacactgagctctgatttc
atcatctccccccatggcaccatcttcccggcaggcgcactggattacgagcgccccaac
catttgtatgagtttgtggtaatggctgtggataagggcgaggtgccacggacaggcaca
gctactgtacgcctgcgtatggccaatgtcaacgatgagccgcccgaattctctcagcca
gtatatcgtacttttgtgtctgaagatgctggacccaataccttggttgcaacggtactg
gctaaagatccagatggtgacggaatcacatacaaaatctcagcaggcaacgaagaaggc
aactttgtcattgacagtcaaaaaggcctgatccgccttcgctccaatcctcaaccaaaa
ttgcaaggggttgagtacatcttgaacatcacagccacagacgacaacgcctctggagga
cctcagtctctgtctgccacggcccaggtcattgtgggagtggatgatgtcaacaacaac
aagcccatctttgagaagtgtcagcagtataaagagatggcgtctgttccagaaaataag
ccggcagggacgtttgtgctgcaggtacacgccgtagacgctgatgagggagccaatggg
aaagtgacatatggcttcatgcacaaagacagcatggtcccagccttcaacatcgatcct
gatacaggtgctatcacgactgcaagaaagttcgatagggagcgacagagggagtatgca
gtgacagtcacggctacagatcaggcagcagatcctctcataggcatctgccaactcaac
atcctcatactggatgagaatgacaacagcccgaagtttgagaatctgcgctatgagtac
ttcttgagggaggacaccatgattggcaccagtttcctgcgagtcgctgcacatgatgat
gactacagcaccaatgcagccatcacgtattccatgtctaaagagcagccagaatacttg
cgtgtcaatcctgtgacaggctgggtttacgtcaaccagcccatctctcagagaacctac
atcaccagagagatcatagccacagatggagggaaccggagtagctctgtagagttggct
gtcaccataaccaatgtgaaaaaccaacctcctcaatgggagaaggaaagctatgaagtg
gtcataccagagaacactgtcagagacactcccatagtgacagtgaaagccacctcacca
ctgggtgaccccagagtgacctataacctggaggatggcatggtacctgagaccaacatg
cctgtgcgtttctacctgacgcccaaccgagaggatggatcagcctccatcctggtggct
gagccgctggattatgagaccacacgcaactttatgctccgtgtacgtgctcagaacgtt
gctgctgtgcctttagctgcttttacaaccgtgtatgtcaacctcacagatgtgaatgac
aatgttccattcttcacctcctctatttatgaggcctctgtgacagaaggggttgaggtt
gggactctggtgcttcaggtgtctgcaaatgaccttgatctgggtttaaatggaaagatc
tcttactccttgctgaatgaccgcagtggagactatcagttcttccgcattgatccagaa
ctgggctctatctacaccgaggcagtgttcgaccgggaaactaagggttcctatctttta
gaagtgaactccatggatggctgggagtctgccaggccaggaaggcatggacagcctaac
tctgacacggcgtatgtacggattttcatcagcgatgtgaacgataacaagccggtgttc
gcacagacggtgtatgaagtcgatgtggatgaggacgcggatgtcggcttcaccatcctc
actgttaacgctaatgatgaagatgaaggtgccaatgctaagctgcgctaccagattact
gcaggtaacacaggtggcgtctttgatgttgagcctgaggtgggcaccatctttatcgcc
caaccactggactatgagcaaaccaaacgttacaagctgtacgtgctggcctcggatggg
aaatgggaggactacactgctgttgtcgtcaacatagtgaataagaatgatgaggcacct
gtgttctctgtcaatgagtactacggcagtgtgactgaagagctggatggttctccagtg
tttgtactgcaggtaacagcgactgacccagataaggatgctgaccaagaggctctacgc
tactcactgcatggtcagggagctgaaagtgaattcatcattgatgaggtgacagggaag
atctatgcccagaggacattggatcgagaggcacgggctgtatggcgctttgtggtttta
gccacagatgagagtggcgaaggcctgactggatttactgatgtcatcattagtgtgtgg
gatattaatgacaatgcccccatctttgcctgtgcaccagacaactgtcatggagatgtg
gctgagaactctccacctggcacttccgtcatggagatgactgccactgatttggatgat
gcagctgtagggcagaatgccatactaacctatagaattgttggtaatgcagccttgagt
ggaggcaacagtggggtggacatgtttaccatcaacccggctaccggaaccatctcgctt
gccaaggctggtctggaccgggagcagacagagtcatacctcctagtggtggaagccagg
gatggaggtgggatgacaggcacagccactgctgccatccatgtaacagatgtgaacgac
cacgctcctcgtttcttggaccgatcttgttcagcacgaatccctgagagcagtgagccc
aacagtgccctgcttgacctggttgctgaggatgctgacgctggtgagaatggtcagctg
acattcagtgtagtatctggagacccagagcagaagttctacatggtgagtcaccgacag
gagcaacggggaaccctacggctcaagaagcgattggattttgagaggccgggtgagcaa
cgcttcaatcttaccattaaggtggaggatctggactactccagccttctctattgtacc
ttagaggtagaggactgcaatgaccatgctccagttttcatccctcacttcctgcagatt
cctgaccttagagaggatgtcttgataggtaccagtgttgcttcagtggtcgccagtgac
tcagattctggtctgaatcgggagattacctacagtatagcacctgaatctgacccatat
gctctcttctcagttgatcagactgggctggtgactgtggccaggcagctggaccgtgag
attaccgcccagcataacttgatcatccttgcaactgaccacggaactccaccattgact
ggcactgccaccatttacatctccctgttggatgtaaatgacaacgggcctgagtttgag
tctgcgtactcaccagtggtgtgggagaatgttccagggcctcagttggtacatctcaac
accagctccatgctgcttagagctgttgatcgtgactctgcagaaaacggttcaccgttc
tccttctctgtccctcctgaataccgttacagcaacgacttttacttgcaagataacagg
aatgacacggccaccatcacagccctcagagcctttgaccgagagagacagaaggagttc
ctgctgccagtcattatgactgacagtggacaacctcccaaaacagtcaccagcacgctc
actatcactatcggtgacaagaatgaccatgcccatgttgctggagagaagacaatatat
ctcaacagtcacagagggagaatgccaacatctgttttgggaaaggtgtatgctccagat
cctgatgactgggacaacaaaacctatgcatttgaaggacatgttcctaattacttcatc
ctgaacaagcggacaggttttctggttataaaagagaatgctccacctggcacctatgac
ttccaggttcgtgtttcggatggcgagtggccagatgctgtgtccagtgtcagagttcac
gtacgagagttacgggacgagattatctacaactctgcctcacttcgtcttgcagaaatc
accgcaaaagagttcatggaacagcgaggggggctacggagcagatacgagttgttggga
gatttcctgtccgagatgttgtctgttggtgcagatgatgttaatatcttcagccttata
gaagtgcgagacaggaccctagacgtgcgcttctctgtgcacagtacccctttccagcgt
gctgagagactgcatggatacctcgctgctcataaacagaagttgcagtcattcctgcag
gtgaatgttacccaggtgcatgtggacgagtgtgtggcggtggactgcagcggaggagga
ggctgtacgaacaggctgattgtgagtgagaagccctccgtggtggattcagacagtatg
gctctggtgtcagtgacactggagtcaacagctgtgtgcagctgctcggcccgggaacac
ctgcaccagggctgctccacctaccccaggaacccctgccacaacggtggagtgtgtgta
gacacacagaatggatacagatgtcagtgcccaggacagtttgatggacctgaatgtcaa
cagaccaagcatagtttccatggcaacgggtatgcctggtttcctcccctaaggccatgc
ttcgagagccatctctctctggagttcatcacggaggtggcagacggcctgctgctctac
agtggcccactcgccccactgcaaccttgggaacctgaggatttcatggctatagagctg
atcgacggcactcccaccctgaagataaaccacggctcgggcactctagtcctgcagttg
ccgggcaacgtgaacgtggcggacagacggtggcacagactggatgtgaggagcaatagc
aaggatgtacgcttcacattagaccgctgtgctggagccacagttatggagatggagggt
gtaggcagctggctgaccacagaggaccacacttcctgtgaggtgttgggagtcacacca
aacctggacaggcatctgaatgggatgcaggtgctacaactaggtggagtgaacgagaac
gtgccctacatctacccccaactccagcacaaacacttcacgggatgcatcagcaacctc
gtcgtcgacagcaaggtatatgatctgagttctccagctgattcctccgggagctctcct
ggctgctcgatgacggacaggagttgcatgaacatgggcttcccctcatgtggcaccagg
ggtcgttgccatggcgaatggggctcctttagctgccagtgcatagctgggtacagcggg
catcagtgtgaacaagagcttcctgagtattcctttgatggtaggagctatgtgcattat
cagctctctgggccgctccaagccagacacacacaggtgcaggttctgatccgaactcgc
aaacacagcagctccatcctcagcctgctctcttcagcacagaatgaatacatccgactt
gagatatttcagggcttgttagctgtcttttacaaccttggagacggagacttcaacctg
acaatgctctctcaccgcctggataacggcgagtggcacgaagttcacttggagcgccac
gataatgagatgactctgagcgtagacggcggcggtggacgaagagaggtcacagggtca
cctggacgcagccgggagatcataattgacccctccttggtcatgctgggaaactcgttt
ccaactggacacaacaaaagcttccaaggctgcatgcgcgacttgaggctaaacggccgc
tccatgcctttggacgctcagcccaaagatggtgtgttagtgcttagcactgtgggagtg
acgctgggctgctcctcagactcctgcaggaggaatcagtgtagccctccattcacctgc
gtcgacctgtggaggatccacgagtgcaggtgtccgccgggtcacatggtcaaggccaac
gctacaggcaaattctgcgtgtacaccctgtgtgccagccggccatgccatcggggtacc
tgcgtggcccaatcgccctccaaattcacatgcgagtgcccagagggctacagggggcgc
cactgcgaggtcacactggccatttatcatgatgatgtgggtctgagtttcagatcactc
tttgccatatgcatctgcttcatggcactgctagttctgctgctggggatctttctatac
acacgctggcggagctacaagggcctgaaggagggcgtgtaccacgtttctgctcatcac
gatggctgggaggacatccgcgagaacgtgctcaactatgacgaggaaggagggggtgag
gaagatcagaatgcttatgacatggcagaactgcagaagtccctgcagccaagtccagcc
cagtcagtgcagtacagtcgctctcgagccctccatcattatcacgcccccatccagcag
caacaacaccacctccatcagtcagacccaccatcccgagctccaacagctactagcact
tcctctgtatcatccagtagtacaaccgtgcgcagagacgtgcccctgaaccacgctcct
gcccagggccagtgtgccgcccctgcagccgcccgcaccacccagcttgcccgcaagagc
ttgtccttctccagccaggacctagcacgctacttatgcgagatcatccgagatgccgag
caacacgcagactctgcacccgctgactctcttcaggtgttctctactgaaggcggaggt
tctccagccggttcactcagttccttcagctcagctggtctggatgagagcagcgctgct
ggacacgagtgcctcaaagattgggggccacgcttcgataaacttcgagcactttatgag
agggcggaggctagcgacctctaa
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integrated database retrieval system