Ictalurus furcatus (blue catfish): 128602987
Help
Entry
128602987 CDS
T09387
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128602987 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ifu01007
]
128602987 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128602987 (cars1)
Enzymes [BR:
ifu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
128602987 (cars1)
Amino acid related enzymes [BR:
ifu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
128602987 (cars1)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128602987 (cars1)
Prokaryotic type
128602987 (cars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
128602987
NCBI-ProteinID:
XP_053473132
LinkDB
All DBs
Position
27:13780854..13800680
Genome browser
AA seq
822 aa
AA seq
DB search
MAGDQAFDYGFLLRISEDGRRAEALNEYLSSRSYLAGYGPSQVDTDAFTLFRGSPPSSQH
VHALRWYRHIATLQPGTDGQASYSTKEKRVQPSWSPPDGSELPNLRLYNSLTRTKELFVP
QHGKKVLWYCCGPTVYDASHMGHARSYISFDILRRILMDYFKYDVFYCMNITDIDDKIIK
RARQNHLLEQYRAKKPKASQILQDVLTAREPFKVKLAETTDPDKKQMLERLDAAVTAALT
PLQGSMKSGAEDAIVQSQAEVLLEEAKDLLSDWLDSQFGSQVTENSIFSLLPKYWEGEYH
KDMEALNVLPPDVLTRVSEYVPEIVEFVKKIVDNGYGYESNGSVYFDTAKFDASSEHSYA
KLVPEAVGDQKALQEGEGDLSISADRLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGW
HIECSAMAGSILGSSMDIHGGGFDLRFPHHDNELAQSEAYFDNDHWVRYFLHTGHLTIAG
CKMSKSLKNFITIKDALARNTARQLRLAFLMHSWKDTLDYSCNTMESAIQYEKFMNEFFL
NVKDILRTPTDITGQFEKWEAEEIDLNKSFYEKKEGVHEALCDNIDTRTALEEMRALVGQ
SNTYMAARKSARLLPNRMLLQSIAHYLTDMFKTFGAIEGTEPIGFPVGRNDQNVDLESTV
MPYLKVLSDFREAIRKIAREQKVTEVLQLCDTVRDDILPELGVRLEDHEGLHTVVKLVDR
ETLLKEREEKKKLEEEKRKKKEEAARKKQEQEVAKLAKMKIPPSEMFRSETDKYSSFDDT
GFPTHDAEGKELSKGQTKKLRKLYEAQEKLYNEYLQATQNGS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgaccaagcctttgattatggcttcttactgcgcataagcgaggacggccgc
agggccgaggctctgaacgagtacctgagcagccgcagttacctggcaggctacgggccc
tcgcaggtggacacagacgcattcacgctttttcgcggttcgcctccttcatcgcagcat
gtgcacgctctgcgctggtacaggcacatagccacactgcagcctggaaccgacggccag
gcctcatactccacaaaggaaaagagagtgcagccttcgtggtctccaccggatggaagt
gaactcccaaatcttagactttacaacagcctgactcggaccaaggagctgtttgtccct
cagcatgggaaaaaggttttgtggtactgctgtggccccaccgtctatgatgcttcccac
atgggtcatgccaggtcctacatttcttttgacatcctaagaagaatcttgatggactat
ttcaaatatgacgtcttctactgcatgaacatcaccgacattgacgacaaaatcattaaa
cgagccagacagaatcacctgctggagcagtacagagccaaaaagcccaaagcctcccag
atcctgcaggacgtcttaactgctagagagccttttaaagtcaagctcgcagaaaccaca
gacccagataaaaagcagatgttggagagactggatgcagcggtgactgctgcactgact
ccactacagggatcgatgaaaagcggagctgaggatgcgatcgttcagagtcaggctgag
gttttactagaagaagccaaggaccttttgtctgattggttggattcccagtttggcagc
caagtaacagaaaactcaatattctccctcttaccgaaatactgggagggagagtatcac
aaagacatggaagccctcaatgttcttccacctgatgtcctcacacgggtcagtgaatat
gttccagagattgtggagtttgtaaagaaaatagtggacaatggatacggttatgagtct
aatggctcagtgtatttcgacactgccaagtttgatgctagttcagaacattcgtatgct
aaactggtgccagaagcagtgggtgaccagaaggctctgcaggagggagaaggagacttg
agtatctcagcagaccggctgagtgagaagcgttcacagaatgactttgccctgtggaag
gcctctaaacctggagaaccgtcctgggattctccatggggaaagggacgacctggttgg
cacatcgagtgttcagccatggctggctccatattaggttcatctatggatattcatgga
ggaggatttgacttgcgtttccctcatcacgacaatgaactggcgcagtccgaggcctac
tttgacaatgaccactgggtacgctatttcttgcacacgggccaccttaccatcgccggc
tgcaagatgtccaagtctctgaagaactttatcaccattaaagatgccctcgcaagaaac
acagcaaggcagctgcgcctggccttcctcatgcactcgtggaaggacacactggattac
tcctgtaacaccatggagtctgccattcagtacgagaagttcatgaatgagttcttcttg
aatgtgaaagatatcctcaggactcccactgatatcacaggtcaatttgagaaatgggag
gcggaggagatcgacctgaacaaaagtttctatgagaagaaagaaggagttcacgaagct
ctatgcgataatatcgacacacgtacagcgctggaggaaatgagggctctggtgggtcag
agcaacacctacatggctgccagaaagagtgccagactcctgcctaaccgtatgctgctc
cagagcattgctcattacctcaccgacatgttcaagacttttggggcaatcgagggaaca
gaacccattggatttcctgttggaagaaatgaccaaaatgttgatctggagagtacagtc
atgccctatttaaaggtgctctcagactttagggaagctatcagaaaaattgcaagggaa
caaaaagtgacagaagtactgcagctgtgtgacacggtcagagatgacatcctgcctgag
ctcggagtccgattagaagatcatgaaggactccacactgtggtgaagttagtggacaga
gagactctactcaaggagagggaggagaagaagaagctggaggaggagaagagaaagaag
aaagaggaggcggccagaaagaaacaggaacaagaggtggctaaactggcaaaaatgaag
attccacctagtgagatgttccgctcagaaactgacaagtactccagctttgatgacacg
ggtttccctacacatgacgcagaagggaaggagcttagcaagggacagaccaaaaagctt
cgcaagctttacgaagctcaggaaaagctgtacaacgagtacctccaggcaacccagaac
ggaagctga
DBGET
integrated database retrieval system
