Ictalurus furcatus (blue catfish): 128603009
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Entry
128603009 CDS
T09387
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128603009 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128603009 (cnot9)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128603009 (cnot9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
128603009
NCBI-ProteinID:
XP_053473158
LinkDB
All DBs
Position
27:complement(4195193..4199924)
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AA seq
297 aa
AA seq
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MLATGAAVSTTMAQVDREKIYQWINELSSPETRENALLELSKKRESVTDLAPMLWHSCGT
IAALLQEIVNIYPSINPATLTAHQSNRVCNALALLQCVASHVETRSAFLAAHIPLFLYPF
LHTASKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMETGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPAQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctggccacgggagcggcggtgagcacgacgatggcacaggtggatcgggagaagatt
taccagtggatcaacgagctgtcgagcccggaaacccgcgagaacgccctgctcgagctc
agcaagaagcgcgagtccgtcactgacctagcccccatgctctggcactcgtgtggcacc
atcgccgcgctccttcaggaaatcgtgaacatctacccctcgattaaccccgctaccctg
acggctcatcagtccaacagggtgtgtaatgccctggcgctgctgcagtgtgtggcctcg
cacgtggagacacgttctgcgttcctggcggcccacatccccctgttcttgtacccgttt
cttcacaccgccagtaaaacaagaccatttgagtatcttcgcctcaccagccttggagtc
atcggagcgttggtaaagacagatgaacaagaagtgattaacttcctgttgacgacagag
atcattcccctgtgcctacggatcatggagacgggcagcgaactctcaaaaacggttgcg
acgttcattttgcagaagatcctgctggatgacacgggcctggcctatatctgccagact
tacgagcgattctctcacgtcgccatgatcctgggaaagatggtgctgcagctgtctaaa
gagccgtcagctcgactgttgaagcacgttgtgcgctgttatctacggctctccgataac
tccagagcgagagaagcgcttcgtcagtgtttaccagaccagctgaaggacacgacgttc
gcacaagtgctgaaggacgacacaaccacgaagcgctggctcgctcaactcgtcaaaaac
ctgcaggagggacaggtcacagacccgcgtggcatcccgctgcctgcccaataa
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