Ictalurus furcatus (blue catfish): 128603041
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Entry
128603041 CDS
T09387
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128603041 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128603041 (lrrc4cb)
Cell adhesion molecules [BR:
ifu04515
]
Immunoglobulin superfamily
NGL family
128603041 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Ig_3
I-set
LRR_14
ig
LRR_9
V-set
Ig_2
LRRNT
LRRCT
Syndecan
Motif
Other DBs
NCBI-GeneID:
128603041
NCBI-ProteinID:
XP_053473198
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All DBs
Position
27:complement(9171753..9199302)
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AA seq
631 aa
AA seq
DB search
MLNKMTSYHQHQMMRGPRWKGAWFDPLFLLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRLPSLRRLDL
GELKRLSYISDGAFEGLSNLRYLNMGMCNLKEVPNIRPLVRLDELEMSGNQLTVIQPGSF
KGLIHLQKLWMMHSQIQTIERNSFDDLQSLSELNLAHNNLTFVPHDLFTPLRHLQRVHLH
HNPWNCNCDILWLSWWLRETVPTNTSCCARCNSPASLKGRYIGELDQSYFQCYAPVIVEP
PADLNVTEGIAVELKCRTNSLTSVSWLTPGGSIMTHGASQARVMVQNDGTLNFTRVTMHD
TGNYTCMVSNMLGNISASAVLNVTSIDNSGFSYFTTVTVETIEPPTDGLSRTPEQSSFGW
VASSTTRATPISTEKAYTIPVTDVDNEGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHNGPTRTMEIISVDDELAGVPAMESHLPLPPLEHDHYNHYNSYKSAYN
HASTLGSLHSSVHEPLLIQASSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttaccatcagcaccagatgatgagaggtcctagatggaaa
ggggcttggtttgaccccttgttcctcctgctcttggctctgcagttgcttgcagtggca
ggattagtaagggcccagacatgtccctctgtgtgttcctgcagcaaccaatttagcaag
gtcatatgcacacgcagaggactcagggaagtccctgatggcatctccaccaacacacgc
tacctgaatcttcaggacaatcttatccaggtcatcaaagtggacagtttcaagcatcta
cggcatttagaaatcctccaacttagcaaaaatcatatccgcaacattgagattggcgcc
ttcaatgggctaaccagccttaacaccctggagctctttgacaatcgcctcacaacgatc
ccaaatggagcttttgaatatctctctaagctcaaagaactatggcttaggaataaccca
attgagagcataccatcctatgctttcaaccgattaccatccttaaggaggctggacttg
ggggagctcaaacgtctctcctatatctcagatggagcatttgagggcttaagcaacttg
cgctacctgaacatgggaatgtgtaacctcaaggaagtccccaacattaggcccttagtt
cgtttggatgagcttgagatgtcagggaaccagctgacggtgatccagcctggttcgttc
aagggtcttatccacctccagaagctgtggatgatgcattcccagatccaaacaattgaa
aggaactcttttgatgaccttcagtcattaagtgagctgaacctggctcataataacctc
acatttgtgccccatgaccttttcactcctttacgccatttgcagagagtacacctacac
cacaatccctggaattgcaactgtgacatcctgtggttaagctggtggctaagggaaacc
gtaccaactaacaccagctgctgcgctcgctgtaactctcctgcaagcctcaaggggcgc
tacattggtgagctggaccagagctactttcaatgttatgcacctgtcattgttgagcct
cctgcagatcttaatgttactgagggaatagcagtggagctcaaatgtcggacaaattct
ctgacctcagtcagttggctaacaccaggtggctccattatgacacatggggcatcccag
gcacgtgtcatggtgcaaaatgatggaacactgaacttcaccagagttacaatgcatgac
acggggaactacacctgcatggtcagcaacatgctgggaaacatttcagcttctgcagtc
ctcaacgtgacctctatagacaacagtggtttcagttacttcaccacagtcactgttgag
accattgagcccccaactgatgggctgagtaggacccctgagcaatcttcctttggctgg
gtggcatcatcaactacaagagcgaccccaatttccacagagaaagcctataccatccct
gtgacagacgtagacaatgagggagctctcaatggtttggaggaggtaatgaagaccacc
aagatcatcatcggctgcttcgtggccatcacactcatggctgccgtcatgctcatcata
ttctacaagatgagaaagcagcaccaccagcaagatcacaatgggccaactcgcacaatg
gagatcatcagtgtagatgacgaactggcaggggttcctgcgatggaaagccacctccct
cttcctccattggagcacgaccactacaaccactacaactcatataagagtgcttacaac
cacgcctcgacactcggctcactacatagctctgtgcatgaacctttactaatccaagcc
agctcaaaagataacgtgcaagagacacaaatttga
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